Job Description P52048 Confidence 96.70% Date Thu Jan 5 12:05:00 GMT 2012 Rank 210 Aligned Residues 105 % Identity 26% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	.	L
Query Conservation																																																																																.
Alig confidence														.												.	.	.																																					.	.	.	.	.	.										.
Template Conservation														.												.	.	.																																					.	.	.	.	.	.
Template Sequence		V	E	N	K	R	V	L	N	C	F	S	Y	.	T	G	G	F	A	V	S	A	L	X	G	.	.	.	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	.	.	.	.	.	.	D	D	V	F	K	L	L	R	T	Y	R
Template Known Secondary structure			T	T							T		T	.	T	T									T	.	.	.	T		S							S															T	T			G	G	G						.	.	.	.	.	.	S
Template Predicted Secondary structure														.												.	.	.																																					.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.																.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S
Template Known Secondary structure			T	T											S	S		S	S	T	T		S	S	S				T												T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions