Job Description P52048 Confidence 96.96% Date Thu Jan 5 12:05:00 GMT 2012 Rank 179 Aligned Residues 120 % Identity 17% Template c3bkxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution Resolution 1.85 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S
Query Conservation
Alig confidence																				.				.																	.
Template Conservation																				.				.																	.
Template Sequence		L	A	I	A	E	A	W	Q	V	K	P	G	E	K	I	L	E	I	.	G	C	G	.	Q	G	D	L	S	A	V	L	A	D	Q	V	G	S	S	G	.	H	V	T	G	I	D	I	A	S	P	D	Y	G	A	P	L	T	L	G	Q	A	W	N	H	L	L	A	G	P	L	G	D	R	L	T	V	H	F	N	T
Template Known Secondary structure									T			T	T							.	S		T	.	T	S												T	T		.							S	S		T	T			S	S	S												S	T	T	G	G	G					S	S
Template Predicted Secondary structure																				.				.																	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	.	.	.	.	.	.	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F
Query Conservation																									.	.	.	.	.	.
Alig confidence														.											.	.	.	.	.	.
Template Conservation														.
Template Sequence		N	L	S	D	D	L	G	P	I	A	D	Q	.	H	F	D	R	V	V	L	A	H	S	L	W	Y	F	A	S	A	N	A	L	A	L	L	F	K	N	X	A	A	V	C	D	H	V	D	V	A
Template Known Secondary structure			T	T	T			G	G	G	T	T		.			S						S		G	G	G	S	S													T	T	T		S
Template Predicted Secondary structure														.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions