Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 55 Aligned Residues 318 % Identity 14% Template c2w4qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure													.	.	.	.	.	.	.	.	.														.
Query SS confidence													.	.	.	.	.	.	.	.	.														.
Query Sequence		M	K	T	K	V	A	A	I	Y	G	K	.	.	.	.	.	.	.	.	.	R	D	V	R	L	R	V	F	E	L	P	E	I	.	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C
Query Conservation													.	.	.	.	.	.	.	.	.														.
Alig confidence													.	.	.	.	.	.	.	.	.														.																										.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		M	I	V	Q	R	V	V	L	N	S	R	P	G	K	N	G	N	P	V	A	E	N	F	R	M	E	E	V	Y	L	P	D	N	I	N	E	G	Q	V	Q	V	R	T	L	Y	L	S	V	D	P	Y	M	R	C	R	M	N	E	D	.	.	.	.	.	.	T	G	T	D	Y	I	T	P	W	Q	L	S	Q	V	V
Template Known Secondary structure															T	T	S				G	G	G										S				T	T													T	T					T	S	S		.	.	.	.	.	.		S	S	T	T	S					B	T	S	B
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		71	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		A	G	V	I	V	.	.	E	V	G	K	N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M
Query Conservation							.	.
Alig confidence							.	.									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		D	G	G	G	I	G	I	I	E	E	S	K	H	T	N	.	L	T	K	G	D	F	V	T	S	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	W	Q	T	K	V	I	L	D	.	.	.	.	G	N	S	L	E	K	V	D	P	Q	L	V	D	G	H	L	S	Y	F	L	G	A
Template Known Secondary structure														S	T	T	.			T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	B	S						.	.	.	.	G	G	G						G	G	G	G	T	T		G	G	G	G	G	T	T
Template Predicted Secondary structure																	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100																		.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	C	I	I	G	A	Y	H	A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A
Query Conservation
Alig confidence			.	.	.	.																																																.	.
Template Conservation			.	.	.	.																																																.	.
Template Sequence		I	.	.	.	.	G	M	P	G	L	T	S	L	I	G	I	Q	E	K	G	H	I	T	A	G	S	N	K	T	M	V	V	S	G	A	A	G	A	C	G	S	V	A	G	Q	I	G	H	F	L	G	C	.	.	S	R	V	V	G	I	C	G	T	H	E	K	C	I	L	L	T	S	E	L	G	F	D	A	A	I
Template Known Secondary structure		T	.	.	.	.	S														S				T	T								S	S	T	T	B													T	T		.	.	S							S											T	S			S
Template Predicted Secondary structure			.	.	.	.																																																.	.
Template SS confidence
		133					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.								290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	.	.	.	.	.	.	.	P	T	D	K	N	F	K	V	P	F	N	F
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	.	.	.	.	.	.	.	.	.	.	.	.	K	K	D	N	V	A	E	Q	L	R	E	S	C	P	A	G	V	D	V	Y	F	D	N	V	G	G	N	I	S	D	T	V	I	S	Q	M	N	E	N	S	H	I	I	L	C	G	Q	I	S	Q	Y	N	K	D	V	P	Y	P	P	P	L	S	P	A	I	E
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S											T	T								S	S										T	T													G	G	G	T	T	S				S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.													.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																																											.
Query SS confidence																				.	.	.	.	.																																											.
Query Sequence		Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	.	.	.	.	.	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation																				.	.	.	.	.																																											.
Alig confidence																				.	.	.	.	.																		.	.																								.
Template Conservation																																										.	.
Template Sequence		A	I	Q	K	E	R	N	I	T	R	E	R	F	L	V	L	N	Y	K	D	K	F	E	P	G	I	L	Q	L	S	Q	W	F	K	E	G	K	L	K	I	.	.	K	E	T	V	I	N	G	L	E	N	M	G	A	A	F	Q	S	M	M	T	G	G	N	I	G	K	Q	I	V
Template Known Secondary structure							T	T								G	G	G	G	G	G	G														T	T		S			.	.								G	G	G										T	T			S	B
Template Predicted Secondary structure																																										.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions