Job Description P52048 Confidence 96.45% Date Thu Jan 5 12:05:00 GMT 2012 Rank 233 Aligned Residues 102 % Identity 13% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L
Query Conservation
Alig confidence															.	.														.	.																																				.	.	.	.											.
Template Conservation															.	.														.	.																																				.	.	.	.											.
Template Sequence		K	E	P	K	N	V	L	V	V	G	G	G	D	.	.	G	G	I	I	R	E	L	C	K	Y	K	S	V	.	.	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	.	.	.	.	I	E	D	A	S	K	F	L	E	N	.
Template Known Secondary structure		S	S										T	T	.	.									T		T	T		.	.								S																	G	G	G	G	S	T	T					.	.	.	.		S							T	T	.
Template Predicted Secondary structure															.	.														.	.																																				.	.	.	.											.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F
Query Conservation
Alig confidence		.												.	.
Template Conservation		.												.	.
Template Sequence		.	V	T	N	T	Y	D	V	I	I	V	D	.	.	S	S	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A
Template Known Secondary structure		.			S									.	.
Template Predicted Secondary structure		.												.	.
Template SS confidence
			186	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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