Job Description P52048 Confidence 95.13% Date Thu Jan 5 12:05:00 GMT 2012 Rank 323 Aligned Residues 110 % Identity 18% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K
Query Conservation
Alig confidence																							.				.															.	.																		.	.	.	.	.
Template Conservation																							.				.															.	.																		.	.	.	.	.
Template Sequence		V	G	S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	.	G	C	G	.	A	G	V	L	S	V	A	F	A	R	H	S	P	K	.	.	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	.	.	.	.	.	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N
Template Known Secondary structure											S		T	T			S	B			B	T	.	T		T	.	T	S											T	T	.	.		B						S	B									.	.	.	.	.						T	T									S
Template Predicted Secondary structure																							.				.															.	.																		.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.												.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	.	.	.	.	.	.	.	.	.	.	.	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		V	F	S	E	V	K	.	.	.	.	.	.	.	.	.	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A
Template Known Secondary structure		T	T	T	T			.	.	.	.	.	.	.	.	.	S													S	S	S															G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions