Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 53 Aligned Residues 316 % Identity 14% Template c2j3iB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent oxidoreductase p1; PDBTitle: crystal structure of arabidopsis thaliana double bond2 reductase (at5g16970)-binary complex Resolution 2.8 Å

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		2	.	.	.	.	.	.	.	10								.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.
Predicted Secondary structure											.	.	.	.	.	.	.															.	.	.																																													.	.
Query SS confidence											.	.	.	.	.	.	.															.	.	.																																													.	.
Query Sequence		K	T	K	V	A	A	I	Y	G	.	.	.	.	.	.	.	K	R	D	V	R	L	R	V	F	E	L	P	E	I	.	.	.	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	.	.	E
Query Conservation											.	.	.	.	.	.	.															.	.	.																																													.	.
Alig confidence											.	.	.	.	.	.	.															.	.	.																																	.	.	.	.									.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		T	N	K	Q	V	I	L	K	D	Y	V	S	G	F	P	T	E	S	D	F	D	F	T	T	T	T	V	E	L	R	V	P	E	G	T	N	S	V	L	V	K	N	L	Y	L	S	C	D	P	Y	M	R	I	R	M	G	K	P	D	P	S	T	A	A	L	.	.	.	.	A	Q	A	Y	T	P	G	Q	P	I	Q
Template Known Secondary structure					B				S	S		B	S	S	S			G	G	G											S				S	S	S													G	G	G	G	T	T	T	B				T	T	T	T			.	.	.	.	.					T	T	S	B
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.					.	1070	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	G	V	I	V	E	V	G	K	N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C
Query Conservation
Alig confidence																.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																			.	.	.	.	.
Template Conservation																.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																			.	.	.	.	.
Template Sequence		G	Y	G	V	S	R	I	I	E	S	G	H	P	D	.	Y	K	K	G	D	L	L	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	V	A	W	E	E	Y	S	V	I	T	P	M	T	.	.	.	.	H	A	H	F	K	I	Q	H	T	D	V	P	L	S	Y	Y	T	G	.	.	.	.	.
Template Known Secondary structure													S	T	T	.			T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	B	S	S							T	.	.	.	.	T	T								S	S		G	G	G	G	G	T	.	.	.	.	.
Template Predicted Secondary structure																.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																			.	.	.	.	.
Template SS confidence
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.		.	.	.	.	.	.	1100	.																.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.					.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	I	G	A	Y	H	A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S
Query Conservation
Alig confidence		.	.	.	.																																																.	.
Template Conservation		.	.	.	.																																																.	.
Template Sequence		.	.	.	.	L	L	G	M	P	G	M	T	A	Y	A	G	F	Y	E	V	C	S	P	K	E	G	E	T	V	Y	V	S	A	A	S	G	A	V	G	Q	L	V	G	Q	L	A	K	M	M	G	C	.	.	Y	V	V	G	S	A	G	S	K	E	K	V	D	L	L	K	T	K	F	G	F	D	D	A	F	N	Y
Template Known Secondary structure		.	.	.	.	T	T	S												T	T	S				T	T						S	S		S	S	T	T										T	T	T		.	.							S	S	T	T							T	T	T			S					T
Template Predicted Secondary structure		.	.	.	.																																																.	.
Template SS confidence
						1135	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.			.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	.	.	.	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y
Query Conservation																																																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																												.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	K	E	E	S	D	L	T	A	A	L	K	R	C	F	P	N	G	I	D	I	Y	F	E	N	V	G	G	.	K	M	L	D	A	V	L	V	N	M	N	M	H	G	R	I	A	V	C	G	M	I	S	Q	Y	N	L	E	N	Q	E	G	V	H	N	L	S	N	I	I	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T		S	S										T	T		B	S					S	S		T	.										B		T	T									T	T	G	G	G		S	S							G	G	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
													1209	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.		.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																													.
Query SS confidence													.	.	.	.	.																																													.
Query Sequence		N	S	T	H	V	V	G	T	S	G	G	.	.	.	.	.	S	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation													.	.	.	.	.																																													.
Alig confidence													.	.	.	.	.																				.	.																								.
Template Conservation																																					.	.
Template Sequence		K	R	N	R	I	Q	G	F	V	V	S	D	F	Y	D	K	Y	S	K	F	L	E	F	V	L	P	H	I	R	E	G	K	I	T	Y	.	.	V	E	D	V	A	D	G	L	E	K	A	P	E	A	L	V	G	L	F	H	G	K	N	V	G	K	Q	V	V
Template Known Secondary structure		S									G	G	G	G	T	T	T	T												T	T	T	S				.	.						B	S	G	G	G								T	T	T	T			S	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		1277	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.			.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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