Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 23 Aligned Residues 328 % Identity 21% Template c2ejvA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-threonine 3-dehydrogenase; PDBTitle: crystal structure of threonine 3-dehydrogenase complexed with nad+ Resolution 2.55 Å

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		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	K	V	A	A	I	Y	G	K	R	D	.	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K	N	L
Query Conservation													.
Alig confidence													.																																								.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		M	R	A	L	A	K	L	A	P	E	E	G	L	T	L	V	D	R	P	V	P	E	P	G	P	G	E	I	L	V	R	V	E	A	A	S	I	C	G	T	D	L	H	I	W	K	W	D	A	W	A	.	.	.	.	R	G	R	I	R	P	P	L	V	T	G	H	E	F	S	G	V	V	E	A	V	G	P	G	V
Template Known Secondary structure									S	S	S	S	S													T	T																					T					.	.	.	.		T	T			S	S																T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.													.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	.	.	.	.	.	.	.	.	.	.	.	.	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																														.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation				.																																																						.	.	.	.
Template Sequence		R	R	.	P	Q	V	G	D	H	V	S	L	E	S	H	I	V	C	H	A	C	P	A	C	R	T	G	N	Y	H	V	C	L	N	T	Q	I	L	G	V	D	R	D	G	G	F	A	E	Y	V	V	V	P	A	E	N	.	.	.	.	A	W	V	N	P	K	D	L	P	F	E	V	A	A	I	L	E	P	F	G
Template Known Secondary structure			S	.	S		T	T												S	S	S					T	T		G	G	G		T	T				B	T	T	T	B			S	S	B	S						G	G	G	.	.	.	.						T	T	S							T
Template Predicted Secondary structure				.																																																						.	.	.	.
Template SS confidence
		77	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	I	G	A	Y	H	A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.																							.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.																							.	.	.	.	.
Template Sequence		N	A	V	H	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	G	S	G	V	S	G	K	S	V	L	I	T	G	A	G	P	I	G	L	M	A	A	M	V	V	R	A	S	G	A	.	.	G	P	I	L	V	S	D	P	N	P	Y	R	L	A	F	A	R	P	Y	A	D	R	.	.	.	.	.
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T			T	T									S													T	T		.	.		S						S						G	G	G	T	T	T		S		.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.																							.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.														.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.																				.																																							.	.
Template Conservation		.	.	.	.	.	.	.																				.																																							.	.
Template Sequence		.	.	.	.	.	.	.	L	V	N	P	L	E	E	D	L	L	E	V	V	R	R	V	T	G	S	.	G	V	E	V	L	L	E	F	S	G	N	E	A	A	I	H	Q	G	L	M	A	L	I	P	G	G	E	A	R	I	L	G	I	P	S	D	P	I	.	.	R	F	D	L	A	G	E	L	V	M	R	G	I
Template Known Secondary structure		.	.	.	.	.	.	.				T	T	T	S											S	S	.									S																										S	S			.	.								T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																				.																																							.	.
Template SS confidence
									212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.
		310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		H	V	V	G	T	S	G	G	S	.	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	G	K	K	L	I	Y	N	G
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		T	A	F	G	I	A	G	R	R	L	W	Q	T	W	M	Q	G	T	A	L	V	Y	S	G	R	V	D	L	S	P	L	L	T	H	R	L	P	L	S	R	Y	R	E	A	F	G	L	L	A	S	G	Q	A	V	K	V	I	L	D	P	K
Template Known Secondary structure								S			T	T													T	S	S			G	G	G							G	G	G											T			S						T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions