Return to main results Retrieve Phyre Job Id

Job DescriptionP52048
Confidence94.23%DateThu Jan 5 12:05:00 GMT 2012
Rank373Aligned Residues96
% Identity15%Templatec2eggA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  AYHANYHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIE
Query Conservation 
                    
  





 
 


 


 
   
     

  
    

  
  


       
  
Alig confidence 














































..



























...
Template Conservation 
 


  
    
          
 











   

   
 ..  
 
 


  

  

           ...
Template Sequence  GYNTDGLGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLSTAA. . ERIDMANRTVEKAERLVREGDERRSAYF. . .
Template Known Secondary structure 

TT


TT


STTT
..S
SSS
SSS

...
Template Predicted Secondary structure 














..







...
Template SS confidence 















































































   119120.........130.........140.........150.........160..... ....170.........180.........190...
 
   234.....240.........250.........260.......
Predicted Secondary structure 















Query SS confidence 

































Query Sequence  LVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAV
Query Conservation     
      
    
   
 
 
 
 
 
  
 
Alig confidence  ..........










...









Template Conservation  ..........           ... 






  
Template Sequence  . . . . . . . . . . SLAEAETRLAE. . . YDIIINTTSV
Template Known Secondary structure  ..........
TGGG...
S
S
T
Template Predicted Secondary structure  ..........





...





Template SS confidence 

































   194.....200.... .....210....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions