Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 4 Aligned Residues 335 % Identity 20% Template c2dphA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dismutase; PDBTitle: crystal structure of formaldehyde dismutase Resolution 2.27 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		T	K	V	A	A	I	Y	G	K	R	D	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	.	.	.	.	.	.	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		N	K	S	V	V	Y	H	G	T	R	D	L	R	V	E	T	V	P	Y	P	K	L	E	H	N	N	R	K	L	E	H	A	V	I	L	K	V	V	S	T	N	I	C	G	S	D	Q	H	I	Y	R	G	R	F	I	V	.	.	.	.	.	.	.	.	P	K	G	H	V	L	G	H	E	I	T	G	E	V	V	E
Template Known Secondary structure										T	T												S			T	T				T	T																				T	T	S	S			.	.	.	.	.	.	.	.		T	T		B
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	K	N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation									.																																																																				.	.	.	.
Template Sequence		K	G	S	D	V	E	L	.	M	D	I	G	D	L	V	S	V	P	F	N	V	A	C	G	R	C	R	N	C	K	E	A	R	S	D	V	C	E	N	N	L	V	N	P	D	A	D	L	G	A	F	G	F	D	L	K	G	W	S	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	Y	M	L	.	.	.	.	L
Template Known Secondary structure				T	T			S	.			T	T							S	B				S		S					T	T		G	G	G				T	T	T		S	S	S	S			B	T	T	T	T	B	S	S				S	S	B	S					S	S						.	.	.	.
Template Predicted Secondary structure									.																																																																				.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K
Query Conservation
Alig confidence												.	.	.	.	.																																		.																			.	.
Template Conservation												.	.	.	.	.																																		.																			.	.
Template Sequence		K	F	G	D	K	E	Q	A	M	E	.	.	.	.	.	K	I	K	D	L	T	L	I	S	D	I	L	P	T	G	F	H	G	C	V	S	A	G	V	K	P	G	S	H	V	Y	I	A	.	G	A	G	P	V	G	R	C	A	A	A	G	A	R	L	L	G	A	.	.	A	C	V	I	V	G	D	Q	N	P	E
Template Known Secondary structure				S	S							.	.	.	.	.	T					T	T	T	T	T												T	T			T	T							.			S														T		.	.	S							S
Template Predicted Secondary structure												.	.	.	.	.																																		.																			.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.															.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	V	V	E	M	A	D	E	L	L	A
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	K	L	L	S	D	A	G	F	E	T	I	D	L	R	.	.	.	.	.	.	.	.	.	.	.	N	S	A	P	L	R	D	Q	I	D	Q	I	L	G	K	P	E	V	D	C	G	V	D	A	V	G	F	E	A	H	G	L	G	D	E	A	N	T	E	T	P	N	G	A	L	N	S	L	F	D	V	V	R
Template Known Secondary structure								T	T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	S	S	S											S	S	S									S		T	T		B		S	G	G	G	T	T	S	B		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.												.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.											.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																													.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																																													.	.
Query Sequence		E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	.	.	.	.	.	.	.	.	.	.	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	.	.	M	V	T	H	I	G	G	L	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.																																													.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Conservation
Template Sequence		A	G	G	A	I	G	I	P	G	I	Y	V	G	S	D	P	D	P	V	N	K	D	A	G	S	G	R	L	H	L	D	F	G	K	M	W	T	K	S	I	R	I	M	T	G	M	A	P	V	T	N	Y	N	R	H	L	T	E	A	I	L	W	D	Q	M	P	Y	L	S	K	V	M	N	I	E	V	I	T	L	D
Template Known Secondary structure										S				S			S	S		S	S					T	T												T	T						S	S			G	G	G	T										T	T																S	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	P	E	T	V	L	N	L	P	D	I	P	G	G	K	K	L	I	Y	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	P	D	G	Y	A	K	F	D	K	G	S	P	A	K	F	V	I	D	P	H
Template Known Secondary structure		T										T	T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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