Job Description P52048 Confidence 93.42% Date Thu Jan 5 12:05:00 GMT 2012 Rank 437 Aligned Residues 146 % Identity 12% Template c2d2iO_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-2 phosphate dehydrogenase from synechococcus sp. complexed3 with nadp+ Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		R	V	A	I	N	G	F	.	G	R	I	G	R	N	F	L	R	C	W	F	G	R	Q	N	T	D	L	E	V	V	A	I	N	N	T	S	D	A	R	T	A	A	H	L	L	E	Y	D	S	V	L	G	R	F	N	A	D	I	S	Y	D	E	N	S	I	T	V	N	G	K	T	M	K	I	V	C	D	R	N	P
Template Known Secondary structure									.	S												T		S	S		S									S	S													T	T	T					S						T	T					T	T									S		G
Template Predicted Secondary structure									.
Template SS confidence
		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	.	.	.	.	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G
Query Conservation																																																				.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		L	N	L	P	W	K	E	W	.	.	.	.	.	.	.	.	D	I	D	L	V	I	E	S	T	G	V	F	V	T	A	E	G	A	S	K	H	I	Q	A	G	A	K	K	V	L	I	T	A	P	G	K	A	E	G	V	G	T	Y	V	I	G	V	N	D	S	E	Y	R	H	E	D	F	A	V	I	S	N	A	S
Template Known Secondary structure		G	G			T	T	T	T	.	.	.	.	.	.	.	.	T								S	S	S			B										T	T		S					S	S			B	S	S	S						T	T	T	T	G	G	G			T	T	T		S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	T	D	D	M	K	E	A	I	A	L	S	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	T	T	N	C	L	A	P	V	A	K	V	L	H	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions