Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 35 Aligned Residues 321 % Identity 18% Template c2cf5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cinnamyl alcohol dehydrogenase; PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5 Resolution 2.0 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		K	T	K	V	A	A	I	Y	G	K	R	D	.	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K	N
Query Conservation														.
Alig confidence														.																																									.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		K	T	T	G	W	A	A	R	D	P	S	G	I	L	S	P	Y	T	Y	T	L	R	E	T	G	P	E	D	V	N	I	R	I	I	C	C	G	I	C	H	T	D	L	H	Q	T	K	N	D	L	G	M	S	.	.	.	.	.	.	.	N	Y	P	M	V	P	G	H	E	V	V	G	E	V	V	E	V	G	S	D
Template Known Secondary structure										S	T	T															T	T																				T		T	T	T			.	.	.	.	.	.	.		S	S	B															S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	.	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A
Query Conservation																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation					.																																																																	.	.	.	.
Template Sequence		V	S	K	.	F	T	V	G	D	I	V	G	V	G	C	L	V	G	C	C	G	G	C	S	P	C	E	R	D	L	E	Q	Y	C	P	K	K	I	W	S	Y	N	D	V	Y	I	N	G	Q	P	T	Q	G	G	F	A	K	A	T	V	V	H	Q	K	F	V	V	K	.	.	.	.	I	P	E	G	M	A	V	E
Template Known Secondary structure				S	.			T	T							S						S	S	S					T	T		G	G	G		T	T				T	T	T	S	B		T	T	S		B				S	S	B	S						G	G	G				.	.	.	.			S	S
Template Predicted Secondary structure					.																																																																	.	.	.	.
Template SS confidence
		82	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Sequence		Q	A	A	P	L	.	.	.	.	.	.	.	.	.	.	.	L	C	A	G	V	T	V	Y	S	P	L	S	H	F	G	L	K	Q	P	G	L	R	G	G	I	L	G	L	G	G	V	G	H	M	G	V	K	I	A	K	A	M	G	H	.	.	H	V	T	V	I	S	S	S	N	K	K	R	E	E	A	L	Q	D
Template Known Secondary structure				T	G	G	.	.	.	.	.	.	.	.	.	.	.	G	T												T	S	T	T	S	T	T									S														T		.	.							S	S	T	T							T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template SS confidence
		157	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		L	G	A	D	D	Y	V	I	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	A	K	M	S	E	L	A	D	S	L	D	Y	V	I	D	T	V	P	V	H	H	A	L	E	P	Y	L	S	L	L	K	L	D	G	K	L	I	L	M	G	V	I	N	N	P	.	.	.	L	Q	F	L
Template Known Secondary structure		S			S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T	T										S				S					T	T											S			S	S		.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.																	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I	Y	N	G
Query Conservation																																																															.
Alig confidence																																						.	.	.																							.
Template Conservation																																						.	.	.
Template Sequence		T	P	L	L	M	L	G	R	K	V	I	T	G	S	F	I	G	S	M	K	E	T	E	E	M	L	E	F	C	K	E	K	G	L	S	S	.	.	.	I	I	E	V	V	K	M	D	Y	V	N	T	A	F	E	R	L	E	K	N	D	V	R	Y	R	F	V	V	D	V	E
Template Known Secondary structure									T								S																T	T				.	.	.							G	G	G										T	T		S	S	S						T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions