Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 58 Aligned Residues 306 % Identity 18% Template c1zsvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12- PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10								.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		T	K	V	A	A	I	Y	G	.	.	.	.	.	.	.	K	R	D	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	T	W	T	L	K	K	H	F	V	G	Y	P	T	N	S	D	F	E	L	K	T	S	E	L	P	P	L	K	N	G	E	V	L	L	E	A	L	F	L	T	V	D	P	Y	M	R	V	A	A	K	R	L	K	.	.	.	.	.	.	.	.	.	.	E	G	D	T	M	M	G	Q	Q	V	A	K	V	V	E
Template Known Secondary structure								S	S			S	S	S			G	G	G													T	T													T						G	G	G	S		.	.	.	.	.	.	.	.	.	.	T	T		B
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	G	K	N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y
Query Conservation
Alig confidence							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	N	V	A	.	.	.	.	L	P	K	G	T	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	P	G	W	T	T	H	S	I	S	D	G	K	D	L	E	K	L	L	T	E	W	P	D	T	I	P	L	S	L	A	L	.	.	.	.	.	.	.	.	.	.	G	T
Template Known Secondary structure			S		T	T	.	.	.	.	S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	B	S						S	T	T						T	T			T	T	S		G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.					.	80	.	.	.	.	.	.																			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.											120	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	N	Y	H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V
Query Conservation
Alig confidence																																															.	.																												.	.	.	.	.	.
Template Conservation																																															.	.																												.	.	.	.	.	.
Template Sequence		V	G	M	P	G	L	T	A	Y	F	G	L	L	E	I	C	G	V	K	G	G	E	T	V	M	V	N	A	A	A	G	A	V	G	S	V	V	G	Q	I	A	K	L	K	G	.	.	C	K	V	V	G	A	V	G	S	D	E	K	V	A	Y	L	Q	K	L	G	F	D	V	V	F	N	Y	.	.	.	.	.	.
Template Known Secondary structure		T	S												T	T	S				S	S						S	S	T	T	S	T	T											T	T	.	.								S	S										T	T		S					T	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.																												.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	.	.	.	.	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V
Query Conservation																																																										.	.	.	.
Alig confidence		.	.	.	.	.																											.																									.	.	.	.
Template Conservation		.	.	.	.	.																											.
Template Sequence		.	.	.	.	.	K	T	V	E	S	L	E	E	T	L	K	K	A	S	P	D	G	Y	D	C	Y	F	D	N	V	G	.	G	E	F	S	N	T	V	I	G	Q	M	K	K	F	G	R	I	A	I	C	G	A	I	S	T	Y	N	R	T	G	P	L	P	P	G	P	P	P	E	I	V	I	Y	Q	E	L	R	M
Template Known Secondary structure		.	.	.	.	.	T	T		S											T	T								S	S		.									T	T													G	G	G	T	T			S	S													T	T
Template Predicted Secondary structure		.	.	.	.	.																											.
Template SS confidence
							194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		312	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																																												.
Query SS confidence									.	.	.	.	.	.																																												.
Query Sequence		V	G	T	S	G	G	S	.	.	.	.	.	.	T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation									.	.	.	.	.	.																																												.
Alig confidence									.	.	.	.	.	.																			.	.																								.
Template Conservation																																	.	.
Template Sequence		E	A	F	V	V	Y	R	W	Q	G	D	A	R	Q	K	A	L	K	D	L	L	K	W	V	L	E	G	K	I	Q	Y	.	.	K	E	Y	I	I	E	G	F	E	N	M	P	A	A	F	M	G	M	L	K	G	D	N	L	G	K	T	I	V
Template Known Secondary structure						G	G	G																			T	T	S	S			.	.								G	G	G										T	T			S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions