Return to main results Retrieve Phyre Job Id

Job DescriptionP52048
Confidence94.95%DateThu Jan 5 12:05:00 GMT 2012
Rank337Aligned Residues132
% Identity10%Templatec1zh8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190 .........200.........210.........220.........230.........240.........250.....
Predicted Secondary structure 



.

























Query SS confidence 













.
































































Query Sequence  NIALLACAGPMGIG. AIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIELVYVNTKGMSDPVQMLRALTGD
Query Conservation   





 
 


 .


 
   
     

  
    

  
  


       
     
      
    
   
 
Alig confidence 




.







.

































..................












Template Conservation 

 

.
 
      
   
        



 
               ..................     
  


  
Template Sequence  RLGIV. GCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKXVGN. . . . . . . . . . . . . . . . . . PAVFDSYEELLES
Template Known Secondary structure  .

STTTTTT
SSSS..................
S
TT
Template Predicted Secondary structure  .












..................



Template SS confidence 















































































   8.10.. .......20.........30.........40.........50..... ....60........
 
   256...260.........270.........280.........290.........300..... ....310.........320.......
Predicted Secondary structure 





















........






Query SS confidence 

















































. . . . . . . .





















Query Sequence  AGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFNFYNVH. . . . . . . . YNSTHVVGTSGGSTDDMKEAIA
Query Conservation   
 
 
 
  
       
   
  

 

  
               
 ........     
 

      
      
Alig confidence 






























.......











........





















Template Conservation     
 
 
 

   
      
   
  
  .......


 
    
   
   
        
    
  
     
 
Template Sequence  GLVDAVDLTLPVELNLPFIEKALRKGVHVIC. . . . . . . EKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKE
Template Known Secondary structure  T

S


GGGTTT
.......SSSSSSSSS

GGGG
Template Predicted Secondary structure 










.......











Template SS confidence 















































































   6970.........80.........90......... 100.........110.........120.........130.........140.
 
   328.330....
Predicted Secondary structure 



Query SS confidence 






Query Sequence  LSATGQL
Query Conservation 

  
 
Alig confidence 






Template Conservation   
  
 
Template Sequence  LVESGAI
Template Known Secondary structure  TTTT
Template Predicted Secondary structure 



Template SS confidence 






   142......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions