Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 40 Aligned Residues 306 % Identity 15% Template c1xa0B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus Resolution 2.80 Å

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		3	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		T	K	V	A	A	I	Y	.	.	.	G	K	R	D	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K
Query Conservation									.	.	.
Alig confidence									.	.	.																																													.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.																	.	.	.
Template Sequence		F	Q	A	F	V	V	N	K	T	E	T	E	F	T	A	G	V	Q	T	I	S	X	D	D	L	P	E	G	D	V	L	V	R	V	H	Y	S	S	V	N	Y	K	D	G	L	A	S	I	P	D	G	K	I	V	.	.	.	.	.	.	.	K	T	P	F	V	P	G	I	D	L	A	G	V	V	V	S	.	.	.
Template Known Secondary structure											S	S											G	G	G	S				S																	T	T	S	S	S	S	T	T		.	.	.	.	.	.	.				B				S									.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y
Query Conservation
Alig confidence		.	.	.																								.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.	.
Template Conservation		.	.	.																								.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		.	.	.	S	Q	H	P	E	G	D	E	V	I	A	T	G	Y	E	I	G	V	T	H	F	G	G	.	.	.	.	.	.	.	.	.	Y	S	E	Y	A	R	L	H	.	.	.	.	G	E	W	L	V	P	L	P	K	G	L	T	L	K	E	A	X	A	.	.	.	.	.	.	.	I	G	T	A	G	F	T	A
Template Known Secondary structure		.	.	.		S											S	T	T	T	T	T	T	S			S	.	.	.	.	.	.	.	.	.	S	B	S						.	.	.	.	T	T	T						T	T									.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																								.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
					75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T
Query Conservation
Alig confidence																																										.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		A	L	S	I	H	R	L	E	E	H	G	L	T	P	E	R	G	P	V	L	V	T	G	A	T	G	G	V	G	S	L	A	V	S	X	L	A	K	R	G	.	.	.	Y	T	V	E	A	S	T	G	K	A	A	E	H	D	Y	L	R	V	L	G	A	K	E	V	L	A	E	R	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T			G	G	G								T	T	S													T	T	.	.	.								S		G	G	G								T		S							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	.	S	G	G	S
Query Conservation																																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.																												.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.																		.																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	I	R	P	L	D	K	Q	R	W	A	A	A	V	D	P	V	G	.	G	R	T	L	A	T	V	L	S	R	X	R	Y	G	G	A	V	A	V	S	G	L	T	G	G	A	E	.	.	V	P	T	T	V	H	P	F	I	L	R	G	V	S	L	L	G	I	D	S	V	Y	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S	S			S	S									S	T	.	T	T	T					G	G	G											S			S	S	S		.	.					S							T								S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.																												.	.
Template SS confidence
												209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure																					.																									.
Query SS confidence																					.																									.
Query Sequence		T	D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	.	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation																					.																									.
Alig confidence																					.																									.
Template Conservation
Template Sequence		P	X	D	L	R	L	R	I	W	E	R	L	A	G	D	L	K	P	D	L	E	R	I	A	Q	E	I	S	L	A	E	L	P	Q	A	L	K	R	I	L	R	G	E	L	R	G	R	T	V	V
Template Known Secondary structure														T	T	T	T													G	G	G										T	T				S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions