Job Description P52048 Confidence 95.11% Date Thu Jan 5 12:05:00 GMT 2012 Rank 325 Aligned Residues 155 % Identity 19% Template c1u4sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: plasmodium falciparum lactate dehydrogenase complexed with 2,6-2 naphthalenedisulphonic acid Resolution 2.00 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T
Query Conservation
Alig confidence												.																	.	.															.																														.	.	.	.	.	.	.
Template Conservation												.																	.	.															.																														.	.	.	.	.	.	.
Template Sequence		P	K	A	K	I	V	L	V	G	S	.	G	M	I	G	G	V	M	A	T	L	I	V	Q	K	N	L	.	.	G	D	V	V	L	F	D	I	V	K	N	M	P	H	.	G	K	A	L	D	T	S	H	T	N	V	M	A	Y	S	N	C	K	V	S	G	S	N	T	Y	D	D	L	A	.	.	.	.	.	.	.
Template Known Secondary structure			S									.	S													T	T		.	.								S	S	S	S				.								T						T									S		G	G	G	G	T	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																	.	.															.																														.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.															.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																					.
Template Conservation		.	.	.																																																					.	.																					.
Template Sequence		.	.	.	G	A	D	V	V	I	V	T	A	G	F	T	K	N	R	D	D	L	L	P	L	N	N	K	I	M	I	E	I	G	G	H	I	K	K	N	C	P	N	A	F	I	I	V	V	T	N	P	V	D	V	M	.	.	V	Q	L	L	H	Q	H	S	G	V	P	K	N	K	I	I	G	L	G	G	.	V	L
Template Known Secondary structure		.	.	.	T		S							S					G	G	G	G																				T	T							S	S	S					.	.												G	G	G							.
Template Predicted Secondary structure		.	.	.																																																					.	.																					.
Template SS confidence
					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	S	R	L	K	Y	Y	I	S	Q	K	L	N	V	C	P	R	D	V	N	A	H	I	V	G
Template Known Secondary structure															T	S		G	G	G							B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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