Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 47 Aligned Residues 334 % Identity 19% Template c1rjwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad(+)-dependent alcohol dehydrogenase2 from bacillus stearothermophilus strain lld-r Resolution 2.35 Å

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		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	K	V	A	A	I	Y	G	K	R	D	.	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K	N	L
Query Conservation													.
Alig confidence													.																																										.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		M	K	A	A	V	V	E	Q	F	K	E	P	L	K	I	K	E	V	E	K	P	T	I	S	Y	G	E	V	L	V	R	I	K	A	C	G	V	C	H	T	D	L	H	A	A	H	G	D	W	P	V	K	P	.	.	.	.	.	.	K	L	P	L	I	P	G	H	E	G	V	G	I	V	E	E	V	G	P	G	V
Template Known Secondary structure							B	S	S	T	T	S														T	T																					T		S	S	S			.	.	.	.	.	.		S	S	B				S											T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		T	G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	.	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y	H
Query Conservation																		.
Alig confidence				.														.																																																					.	.	.	.
Template Conservation				.																																																																			.	.	.	.
Template Sequence		T	H	.	L	K	V	G	D	R	V	G	I	P	W	L	Y	S	A	C	G	H	C	D	Y	C	L	S	G	Q	E	T	L	C	E	H	Q	K	N	A	G	Y	S	V	D	G	G	Y	A	E	Y	C	R	A	A	A	D	Y	V	V	K	I	P	D	N	L	S	F	E	E	.	.	.	.	A	A	P	I	F	C	A
Template Known Secondary structure			S	.			T	T							S						S		S					T	T		G	G	G		T	T				B	T	T	T	B			S	S	B	S						G	G	G						T	T	S					.	.	.	.		G	G	G	G	T
Template Predicted Secondary structure				.																																																																			.	.	.	.
Template SS confidence
		75	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K
Query Conservation
Alig confidence																																									.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	T	T	Y	K	A	L	K	V	T	G	A	K	P	G	E	W	V	A	I	Y	G	I	G	G	L	G	H	V	A	V	Q	Y	A	K	A	M	G	.	.	.	L	N	V	V	A	V	D	I	G	D	E	K	L	E	L	A	K	E	L	G	A	D	.	.	.	.	.	.	.	.	.	.	.	L	V	V	N	P
Template Known Secondary structure													T			T	T									S	T	T											T	T	.	.	.								S											T	T		S	.	.	.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure																																									.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210												.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D
Query Conservation
Alig confidence																	.	.																																					.	.	.
Template Conservation																	.	.																																					.	.	.
Template Sequence		L	K	E	D	A	A	K	F	M	K	E	K	V	G	G	.	.	V	H	A	A	V	V	T	A	V	S	K	P	A	F	Q	S	A	Y	N	S	I	R	R	G	G	A	C	V	L	V	G	L	P	P	E	E	.	.	.	M	P	I	P	I	F	D	T	V	L	N	G	I	K	I	I	G	S	I	V	G	T	R	K
Template Known Secondary structure		T	T	S											S	S	.	.							S	S																										S	S		.	.	.											T	T								S
Template Predicted Secondary structure																	.	.																																					.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		D	M	K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I	Y	N	G
Query Conservation																																											.
Alig confidence																		.	.	.																							.
Template Conservation																		.	.	.
Template Sequence		D	L	Q	E	A	L	Q	F	A	A	E	G	K	V	K	T	.	.	.	I	I	E	V	Q	P	L	E	K	I	N	E	V	F	D	R	M	L	K	G	Q	I	N	G	R	V	V	L	T	L	E
Template Known Secondary structure												T	T	S				.	.	.							G	G	G										T	T			S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions