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Job DescriptionP52048
Confidence100.00%DateThu Jan 5 12:05:00 GMT 2012
Rank9Aligned Residues331
% Identity20%Templatec1pl6A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KTKVAAIYGKRDVRLRVFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNL
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Template Sequence  NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYG. . . . RIGNFIVKKPXVLGHEASGTVEKVGSSV
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Query Sequence  TGKYKKGQRFVLQPAMGLPSGYSAGYSY. . . . . . . . . . . . . EYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPM
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Template Sequence  KH. LKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGNLCRFYKHN. . . . AAFCYKLPDNVTFEEGALIEPL
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   83. .....90.........100.........110.........120.........130..... ....140.........150.......
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  CCIIGAYHANYHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAA
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Template Sequence  SVGIHACR. . . . . . . . . . . . RGGVTLGHKVLVC. GAGPIGXVTLLVAKAXGA. . AQVVVTDLSATRLSKAKEIGADLVLQ
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   158.160..... ....170........ .180.........190...... ...200.........210.........220..
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  SKGIELVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNS
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Template Sequence  ISK. . . . . . . . . ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEX. . . TTVPLLHAAIRE
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   223.. ....230.........240.........250.........260.........270........ .280.........290
 
   309310.........320.........330.........340.........350.........360.........
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Query Sequence  THVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIPGGKKLIYNG
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Template Sequence  VDIKGVFRYCN. TWPVAISXLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIXLKCD
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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