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Job DescriptionP52048
Confidence100.00%DateThu Jan 5 12:05:00 GMT 2012
Rank15Aligned Residues329
% Identity17%Templatec1p0fA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: crystal structure of the binary complex: nadp(h)-dependent vertebrate2 alcohol dehydrogenase (adh8) with the cofactor nadp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKTKVAAIYGKRD. VRLRVFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLENHPVITGHECAGVIVEVGK
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Template Sequence  ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS. . . . . . . . KFPVILGHEAVGVVESIGA
Template Known Secondary structure  BSSTTS





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   1007..1010.........1020.........1030.........1040.........1050......... 1060.........1070........
 
   80.........90.........100.........110 .........120......
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Query Sequence  NLTGKYKKGQRFVLQPAMGLPSGYSAGYSYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YFGGNATYMIIPEIAI
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Template Sequence  GVTC. VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA. . . .
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   10791080.. .......1090.........1100.........1110.........1120.........1130.........1140.........1150...
 
   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  NLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVV
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Template Sequence  DIAVAKIDPKAPLESCLIGCGFATGYGAAV. . . . . . . . . . . . NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGA. . SRII
Template Known Secondary structure  TTS
TT

GGGGGGGT............TTT


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   1154.....1160.........1170.........1180... ......1190.........1200.........1210..... ....
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  VVDIDDKRLAQVQKLLPVELAASKGIELVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNF
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Template Sequence  GVGTHKDKFPKAIELGATE. . . . . . . . . CLNPKDYDKPIYEVICEKTNG. GVDYAVECAGRIETMMNALQSTYCGSGVTV
Template Known Secondary structure 
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   1220.........1230........ .1240.........1250......... 1260.........1270.........1280.........
 
   287..290.........300.........310..... ....320.........330.........340.........350.........360. ..
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Query Sequence  FAGPTDKNFKVPFNFYNVHYNSTHVVGTS. . GGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIPG. GK
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Template Sequence  VLGLASPNERLPLD. PLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRS
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   1290.........1300... ......1310.........1320.........1330.........1340.........1350.........1360........
 
   364...
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Query Sequence  KLIY
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Template Sequence  IMIY
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   13691370..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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