Job Description P52048 Confidence 96.30% Date Thu Jan 5 12:05:00 GMT 2012 Rank 247 Aligned Residues 134 % Identity 19% Template c1l7eC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh Resolution 1.90 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M	S	D	P	V	Q	M	L	R	A	L	T	G	D
Query Conservation
Alig confidence																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	R	V	L	V	F	G	V	G	V	A	G	L	Q	A	I	A	T	A	K	R	L	G	.	.	.	A	V	V	M	A	T	D	V	R	A	A	T	K	E	Q	V	E	S	L	G	G	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	Q	A	E	A	V	L	K	E	L	V	K
Template Known Secondary structure											S													T	T	.	.	.								S	S	T	T	S					T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		972	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.				.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.																		.	1020	.	.	.	.	.	.	.	.	.	1030	.
		256	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		A	G	F	D	D	I	F	V	Y	A	A	V	P	.	.	.	.	.	.	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D	D	M	K	E	A	I	A	L	S
Query Conservation															.	.	.	.	.	.
Alig confidence		.	.												.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	D	I	A	I	T	T	A	L	I	P	G	K	P	A	P	V	L	I	T	E	E	M	V	T	K	M	K	P	G	S	V	I	I	D	L	A	V	E	A	G	G	N	C	P	L	S	E	P	G	K	I	V	V	K	H	G	V	K	I	V	G	H	T	N	V	P	S	R	V	A	A	D	A	S	P	L	F
Template Known Secondary structure		.	.		S									T	T	S						S							T	S		T	T						T	T	G	G	G	T		S	S	T	T			T	T						T	T							S		G	G	G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				1058	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.
		330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1136	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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