Job Description P52048 Confidence 100.00% Date Thu Jan 5 12:05:00 GMT 2012 Rank 57 Aligned Residues 290 % Identity 19% Template c1iz0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of the quinone oxidoreductase from2 thermus thermophilus hb8 and its complex with nadph Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	V	A	A	I	Y	G	K	R	D	.	V	R	L	R	V	F	E	L	P	E	I	T	D	N	E	L	L	V	S	V	I	S	D	S	V	C	L	S	T	W	K	A	A	L	L	G	S	E	H	K	R	V	P	D	D	L	E	N	H	P	V	I	T	G	H	E	C	A	G	V	I	V	E	V	G	K	N	L	T
Query Conservation												.
Alig confidence												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	W	V	L	K	R	L	G	G	P	L	E	L	V	D	L	P	E	P	E	A	E	E	G	E	V	V	L	R	V	E	A	V	G	L	N	F	A	D	H	L	X	R	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	T	R	L	H	P	P	F	I	P	G	X	E	V	V
Template Known Secondary structure								S	T	T	S														T	T																					T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S				S	S	B
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Y	K	K	G	Q	R	F	V	L	Q	P	A	M	G	L	P	S	G	Y	S	A	G	Y	S	Y	E	Y	F	G	G	N	A	T	Y	M	I	I	P	E	I	A	I	N	L	G	C	V	L	P	Y	H	G	S	Y	F	A	A	A	S	L	A	E	P	M	C	C	I	I	G	A	Y	H	A	N	Y	H	T	T
Query Conservation
Alig confidence			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	V	V	E	G	R	R	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	V	P	Q	G	G	L	A	E	R	V	A	V	P	.	.	.	.	K	G	A	L	L	P	L	P	E	G	L	S	P	E	E	A	A	A	F	.	.	.	.	.	.	.	.	.	.	.	P	V	S	F	L	T
Template Known Secondary structure			.			T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S			S	B	S						.	.	.	.	G	G	G						T	T								T	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65		.	.	.	.	70	.	.	.																.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.												.	.	110	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	V	Y	E	H	R	M	G	V	K	P	G	G	N	I	A	L	L	A	C	A	G	P	M	G	I	G	A	I	D	Y	A	I	N	G	G	I	Q	P	S	R	V	V	V	V	D	I	D	D	K	R	L	A	Q	V	Q	K	L	L	P	V	E	L	A	A	S	K	G	I	E	L	V	Y	V	N	T	K	G	M
Query Conservation
Alig confidence																																							.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	L	A	L	K	R	A	Q	A	R	P	G	E	K	V	L	V	Q	A	A	A	G	A	L	G	T	A	A	V	Q	V	A	R	A	X	G	.	.	.	L	R	V	L	A	A	A	S	R	P	E	K	L	A	L	P	L	A	L	G	A	E	E	A	A	T	Y	A	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T			T	T						S	S	T	T	B													T	T	.	.	.								S	S	G	G	G	S						T	T		S					G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	P	V	Q	M	L	R	A	L	T	G	D	A	G	F	D	D	I	F	V	Y	A	A	V	P	A	V	V	E	M	A	D	E	L	L	A	E	D	G	C	L	N	F	F	A	G	P	T	D	K	N	F	K	V	P	F	N	F	Y	N	V	H	Y	N	S	T	H	V	V	G	T	S	G	G	S	T	D	D	M
Query Conservation
Alig confidence		.	.	.	.																							.	.																								.	.	.	.
Template Conservation		.	.	.	.																							.	.																								.	.	.	.
Template Sequence		.	.	.	.	E	V	P	E	R	A	K	A	W	G	G	L	D	L	V	L	E	V	R	G	K	E	.	.	V	E	E	S	L	G	L	L	A	H	G	G	R	L	V	Y	I	A	P	I	P	P	L	.	.	.	.	R	L	X	R	R	N	L	A	V	L	G	F	W	L	T	P	L	L	R	E	G	A	L	V	E
Template Known Secondary structure		.	.	.	.	G								T	T	S								S		T	T	.	.						T	T															T	T	.	.	.	.					T	T												T	T
Template Predicted Secondary structure		.	.	.	.																							.	.																								.	.	.	.
Template SS confidence
						179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		K	E	A	I	A	L	S	A	T	G	Q	L	Q	P	S	F	M	V	T	H	I	G	G	L	D	A	V	P	E	T	V	L	N	L	P	D	I	P	G	.	G	K	K	L	I
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		E	A	L	G	F	L	L	P	R	L	G	R	E	L	R	P	V	V	G	P	V	F	P	F	A	E	A	E	A	A	F	R	A	L	L	D	R	G	H	T	G	K	V	V	V
Template Known Secondary structure								G	G	G	B	T	T	T	B										G	G	G								T	T		T	T			B
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions