Return to main results Retrieve Phyre Job Id

Job DescriptionP76091
Confidence14.78%DateThu Jan 5 12:18:45 GMT 2012
Rank56Aligned Residues24
% Identity13%Templatec3spuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:beta-lactamase ndm-1; PDBTitle: apo ndm-1 crystal structure
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270........
Predicted Secondary structure 














Query SS confidence 


























Query Sequence  VMSAIKRDIGVKDSGKLLPGHGGLLDR
Query Conservation   

 


  





 










Alig confidence 











...











Template Conservation 
  
        ... 





     
Template Sequence  ARAFGAAFPKAS. . . MIVMSHSAPDSR
Template Known Secondary structure  STT

...TT
T
Template Predicted Secondary structure 



...






Template SS confidence 


























   233......240.... .....250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions