 |
Job Description | P23909 | Confidence | 96.03% | Date | Thu Jan 5 11:40:34 GMT 2012 |
Rank | 109 | Aligned Residues | 123 |
% Identity | 20% | Template | d1mo6a1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RecA protein-like (ATPase-domain)
|
Resolution | 3.20 |
|
 |
  |   |
605 | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | |
. | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Q | R | R | M | L | I | I | T | G | P | N | M | G | G | K | S | T | Y | M | R | Q | T | A | L | I | A | L | M | A | Y | I | G | S | Y | V | P | A | Q | K | V | E | I | G | P | I | D | R | I | F | T | R | V | G | . |
A | A | D | D | L | A | S | G | R | S | T | F | M | V | E | M | T | E | T | A | N | I | L | H | N |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|   |
|   |
|
|
|
|
|
| . |   |   |
|   |
|   |   |
|   |
|
|
|   |   |
|
|   |
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   | . | . |   |   |   |
|   |   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
P | R | G | R | V | I | E | I | Y | G | P | E | S | S | G | K | T | T | V | A | L | H | A | V | A | N | A | . |
. |
Q | A | A | G | G | V | A | A | F | I | D | A | E | H | A | L | D | P | D | Y | A | K | K | L | G | V | D | T | D | S | L | L | V | S | Q | P | D | T | G | E | Q | A | L | E | I | A | D | M | L | I | R |
Template Known Secondary structure |   |
| S | S | S |  |  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | T | T |
|  |  |  |  |  |  | S | S |
|
|
|
|  |  |  |  |  |  |  | T |
|
| G | G | G |
|  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
  |   |
684 | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | E | Y | S | L | V | L | M | D | E | I | G | R | G | T | S | T | Y | D | G | . |
. |
. |
. |
. |
. |
. |
. |
L | S | L | A | W | A | C | A | E | N | L | A | N | K | I | K | A | L | T | L | F | A | T | H | Y |
Query Conservation |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
| . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|   |
Template Sequence |   |
S | G | A | L | D | I | V | V | I | D | S | V | A | A | L | V | P | R | A | E | L | E | V | G | L | Q | A | R | L | M | S | Q | A | L | R | K | M | T | G | A | L | N | N | S | G | T | T | A | I | F | I | N | Q | L |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  |
| S | T | T |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|