Job Description P23909 Confidence 96.49% Date Thu Jan 5 11:40:34 GMT 2012 Rank 93 Aligned Residues 174 % Identity 16% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		605	.	.	.				.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.		.	660	.	.	.	.	.	.	.	.					.	670	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																																																			.											.	.	.	.
Query SS confidence						.	.	.																																																			.											.	.	.	.
Query Sequence		P	Q	R	R	.	.	.	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	P	I	D	R	I	F	T	R	V	G	.	A	A	D	D	L	A	S	G	R	S	.	.	.	.	T	F	M	V	E	M	T	E
Query Conservation						.	.	.																																																			.											.	.	.	.
Alig confidence						.	.	.																																																			.											.	.	.	.
Template Conservation
Template Sequence		T	G	G	M	Q	S	G	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	G	V	D	P	E	R	V	I	H	T	P	V	Q	S	L	E	Q	L	R	I	D	M	V	N
Template Known Secondary structure		T					S									S	S	S	S																	T	T								S	S											T	T			G	G	G							S	B
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.			.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740									.	.	.	.	.	.
Predicted Secondary structure																																					.	.																														.	.	.	.	.	.	.	.
Query SS confidence																																					.	.																														.	.	.	.	.	.	.	.
Query Sequence		T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	.	.	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q	L	P	E	K	M	E	.	.	.	.	.	.	.	.	G	V	A	N	V	H
Query Conservation																																					.	.																														.	.	.	.	.	.	.	.
Alig confidence									.																												.	.																					.	.								.	.	.	.	.	.	.	.
Template Conservation									.																																																		.	.
Template Sequence		Q	L	D	A	I	E	R	.	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	R	A	K	T	M	K	S	L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I	A	I	N	H	T	Y	T	.	.	G	P	M	Y	S	A	D	T	V	F	I	I	G	K	R	Q	F	V	L	N	V
Template Known Secondary structure					T			T	.	T										S	T	T		B																						T	T												.	.		G	G	G	G	S	S
Template Predicted Secondary structure									.																																																		.	.
Template SS confidence
		128	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		747	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.			.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	D	A	L	E	H	G	D	T	I	A	F	M	H	S	V	Q	D	G	.	.	A	A	S	K	S	Y	G	L	A	V	A	A	L	A	G	V
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		E	K	S	R	T	V	K	E	K	S	K	F	F	I	D	V	K	F	D	G	G	I	D	P	Y	S	G	L	L	D	M	A	L	E	L	G	F
Template Known Secondary structure					S	S	B		T	T							B		T	T	S		B		T	T	T	T									T	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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