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Job DescriptionP23909
Confidence97.99%DateThu Jan 5 11:40:34 GMT 2012
Rank52Aligned Residues138
% Identity17%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   575....580.........590.........600.... .....610.........620.........630.........640.........650...
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Query Sequence  KPGIRITEGRHPVVEQVLNEPFIANPLNLS. PQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRI
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Template Sequence  GGQMTVKDLTAKYT. . . EGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFL. . . . . . . . R. LLNTE. GEIQIDGVS
Template Known Secondary structure  S

SS...TTS

TT

TTSST........T.
S.TT
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   1207..1210.........1220 .........1230.........1240.........1250........ . 1260.... .....1270...
 
   654.....660 .........670....
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Query Sequence  FTRVGAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDLASGRSTFMVEM
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Template Sequence  WDSITLEQWRKAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQL
Template Known Secondary structure  SSSS
GGGS





SSB
TTS
S
TTTT
TTTGGGSTTGGG
B

TTTTTS
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   1274.....1280.........1290.........1300.........1310.........1320.........1330.........1340.........1350...
 
   675....680.........690.........700.........710.........720.........730.
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Query Sequence  TETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFE
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Template Sequence  MCLARSVL. . SKAKILLLDEP. . . SAHLD. PVTYQIIRRTLKQAFADCTVILCEARI
Template Known Secondary structure  ..TT

S...S
.TTTTS
SSG
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   1354.....1360. ........1370.. ..... ..1380.........1390.........1400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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