Return to main results Retrieve Phyre Job Id

Job DescriptionP23909
Confidence95.22%DateThu Jan 5 11:40:34 GMT 2012
Rank148Aligned Residues121
% Identity17%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   604.....610.........620.........630........ .640.........650... ......660.........670.......
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Query Sequence  SPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGS. . . YVPAQKVEIGPIDRI. . . FTRVGAADDLASGRSTFMVEMTET
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Template Sequence  AEKPYVIMFVGFNGSGKTTTIAKLA. . NWLKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDA
Template Known Secondary structure  S
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TTSS..TT


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   120.........130.........140.... .....150.........160.........170.........180.........190.......
 
   678.680.........690.........700.........710.........720.......
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Query Sequence  ANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFAT
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Template Sequence  IQHAKAR. GIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDAL
Template Known Secondary structure  .T
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   198.200.... .....210.........220.........230.........240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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