Job Description P23909 Confidence 98.28% Date Thu Jan 5 11:40:34 GMT 2012 Rank 25 Aligned Residues 137 % Identity 20% Template c3dhwC_ PDB info PDB header:membrane protein/hydrolase Chain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni Resolution 3.70 Å

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		596	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.																									.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		F	I	A	N	P	L	N	L	S	.	P	Q	R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	P	.
Query Conservation											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.												.
Template Conservation																																																																					.
Template Sequence		Q	A	L	N	N	V	S	L	H	V	P	A	G	Q	I	Y	G	V	I	G	A	S	G	A	G	K	S	T	L	I	R	C	V	N	L	L	E	R	P	T	E	G	S	V	L	V	D	G	Q	E	L	T	T	L	S	E	S	E	L	T	K	A	R	R	Q	I	G	.	M	I	F	Q	H	F	N	L	L	S	S	R
Template Known Secondary structure													S	S								S	T	T	S	S									T	T	S	S			S							T	T					T	T														.				S	S					T	T	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.
																									650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.		.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	R	I	F	T	R	V	G	A	A	D	D	L	A	S	G	R	S	T	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	.	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		T	V	F	G	N	V	A	L	P	L	E	L	D	N	T	P	K	D	E	V	K	R	R	V	T	E	L	L	S	L	V	G	L	G	D	K	H	D	S	Y	P	S	N	L	S	G	G	Q	K	Q	R	V	A	I	A	R	A	L	A	S	N	P	K	V	L	L	C	D	E	A	T	S	A	L	D	P	A	T	T	R
Template Known Secondary structure		B											T	T	T			T	T														S	T	T	T	T	T	S	S		B	S																		T			S						S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	W	A	C	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		S	I	L	.	E	L	L	K	D	I	N	R	R	L	G	L	T	I	L	L	I	T	H	E	M	D	V	V	K
Template Known Secondary structure					.																		B	S
Template Predicted Secondary structure					.
Template SS confidence
		178	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions