Job Description P23909 Confidence 83.85% Date Thu Jan 5 11:40:34 GMT 2012 Rank 368 Aligned Residues 86 % Identity 20% Template c3cmwA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 2.80 Å

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		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.		.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.		.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
Predicted Secondary structure																					.																																				.
Query SS confidence																					.																																				.
Query Sequence		P	Q	R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	.	M	R	Q	T	A	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	P	I	D	R	I	F	T	R	V	G	.	A	A	D	D	L	A	S	G	R	S	T	F	M	V	E	M	T	E	T	A	N	I	L	H
Query Conservation																					.																																				.
Alig confidence																					.																														.	.	.				.
Template Conservation																																																			.	.	.
Template Sequence		P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	.	.	.	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A
Template Known Secondary structure			T	T	S							S	T	T	S	S															T	T								T	T	S									.	.	.		T	T			G	G	G							S	S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		1057	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.				.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.
		683	.	.	.	.	.	.	690	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	T	E	Y	S	L	V	L	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	G	A	V	D	V	I	V	V	D
Template Known Secondary structure				T			S					S
Template Predicted Secondary structure
Template SS confidence
		1134	.	.	.	.	.	1140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions