Job Description P23909 Confidence 95.20% Date Thu Jan 5 11:40:34 GMT 2012 Rank 149 Aligned Residues 123 % Identity 14% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.		.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.			.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure																																.																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	L	I	A	L	M	A	Y	I	.	G	S	Y	V	P	A	Q	K	V	E	I	G	P	I	D	R	I	F	T	R	V	G	.	.	A	A	D	D	L	A	S	G	R	S	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G
Template Known Secondary structure		S									S	S	S	S															T	T								S	S	S														S									T	T	G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
																		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.			.	.	.	690	.	.	.	.	.							.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	.	.	Y	S	L	V	L	M	D	E	I	.	.	.	.	.	.	G	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L
Template Known Secondary structure					T	S								S	S		B															S		S	S									S	S	S	S	B		S		S	S	S																					T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		727	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		355	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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