Return to main results Retrieve Phyre Job Id

Job DescriptionP23909
Confidence98.32%DateThu Jan 5 11:40:34 GMT 2012
Rank18Aligned Residues146
% Identity18%Templatec2yz2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   576...580.........590.........600.... .....610.........620.........630.........640. ....
Predicted Secondary structure 










.













.........



Query SS confidence 




























.




































. . . . . . . . .



Query Sequence  PGIRITEGRHPVVEQVLNEPFIANPLNLS. PQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVP. . . . . . . . . AQKV
Query Conservation    
 
   


 

       




 
 .      











 

 


  





  

.........
  
Alig confidence 




























.






















........





.........



Template Conservation 
 


 

   
         

  

  
  

   


 








  
........ 
      
 
   
    
Template Sequence  MRIEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIV. . . . . . . . AGLIEPTSGDVLYDGERKK
Template Known Secondary structure 

TTTSTT

TT

STT

........TTSS

STT

Template Predicted Secondary structure 




















........

















Template SS confidence 















































































   1........10.........20.........30.........40.........50... ......60.........70..
 
   646...650.........660.........670.........680 ..
Predicted Secondary structure 












...........................................
Query SS confidence 


































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Query Sequence  EIGPIDRIFTRVGAADDLASGRSTFMVEMTETANI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LH
Query Conservation   
 
 
 





  
 
  
 


  

 
   
...........................................
 
Alig confidence 


































...........................................

Template Conservation                                                                    

 

 


 



Template Sequence  GYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASV
Template Known Secondary structure  GGG
SSGGGG


SS
TTS
T

TTS
GGGS
Template Predicted Secondary structure 

































Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   683......690.........700.........710.........720.........730.
Predicted Secondary structure 

















Query SS confidence 
















































Query Sequence  NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFE
Query Conservation   

  












  

 


 



 
        




  
Alig confidence 


























.







.











Template Conservation 
   
 







 


      
  . 
  
   .
 


 


   
Template Sequence  IVHEPDILILDEPLVGLDREGKTDLLR. IVEKWKTL. GKTVILISHDIE
Template Known Secondary structure  TT

SSTTTT

.T.T

S
Template Predicted Secondary structure 









.
.



Template SS confidence 
















































   153......160.........170......... 180....... ..190.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions