Job Description P23909 Confidence 97.83% Date Thu Jan 5 11:40:34 GMT 2012 Rank 61 Aligned Residues 204 % Identity 18% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.					.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		L	Y	E	E	L	F	D	L	L	L	P	H	L	E	A	L	Q	Q	S	A	S	A	L	A	E	L	D	V	L	V	N	L	A	E	R	A	Y	T	L	N	Y	T	C	P	T	F	I	D	K	P	G	.	.	.	.	I	R	I	T	E	G	R	H	P	V	V	E	Q	V	L	N	E	P	F	I	A	N	P	L	N
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.												.	.
Template Conservation																																																																				.	.
Template Sequence		Y	A	F	W	V	G	I	S	I	G	G	L	S	S	F	Y	S	E	L	M	K	G	L	G	A	G	G	R	L	W	E	L	L	E	R	E	P	K	L	P	F	N	E	G	V	I	L	N	E	K	S	F	Q	G	A	L	E	F	K	N	V	H	F	A	Y	P	.	.	A	R	P	E	V	P	I	F	Q	D	F	S
Template Known Secondary structure																																			T				S	S		S	S		S	B				T	T	T															S	.	.	S		T	T	S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.
		603	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.																						.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	.	P	Q	R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	P	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.
Template Sequence		L	S	I	P	S	G	S	V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	D	P	A	S	G	T	I	S	L	D	G	H	D	I	R	Q	L	N	P	V	W	L	R	S	K	I	G	.	T	V	S	Q	E	P	I	L	F	S	C	S	I	A	E	N	I	A	Y	G	A	D
Template Known Secondary structure						T	T									T	T	S	S	S	T							T	T	S	S			S							T	T			T	T	T	B								S			.				S	S					S	S	B							T	T	S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
											650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.															.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	I	D	R	I	F	T	R	V	G	A	A	D	D	L	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	S	T	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D	G	L	S
Query Conservation		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																											.	.
Template Sequence		D	P	S	S	V	T	A	E	E	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	T	V	V	G	E	K	G	V	L	L	S	G	G	Q	K	Q	R	I	A	I	A	R	A	L	L	K	.	.	N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L
Template Known Secondary structure		S	T	T	T	S												T	T							T	S	S	S	G	G	G		B		S	S	S	S																				.	.			S									S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650			.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	A	C	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q	L	P	E	K
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		V	Q	E	A	L	D	R	L	M	.	.	.	D	G	R	T	V	L	V	I	A	H	R	L	S	T	I	K	N	A	N	M
Template Known Secondary structure											.	.	.	T	T	S															S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		672	.	.	.	.	.	.	.	680				.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions