Return to main results Retrieve Phyre Job Id

Job DescriptionP23909
Confidence85.82%DateThu Jan 5 11:40:34 GMT 2012
Rank345Aligned Residues122
% Identity18%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   605....610.........620.........630......... 640.........650... ......660.........670........
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Query Sequence  PQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSY. . . VPAQKVEIGPIDRI. . . FTRVGAADDLASGRSTFMVEMTETA
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Template Sequence  KDRNLWFLVGLQGSGKTTTAAKLALY. . YKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVE
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   96...100.........110.........120. ........130.........140.........150.........160.........170...
 
   679680.........690.........700...... ...710.........720.........
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Query Sequence  NILHNATEYSLVLMDEIGRGTSTYDGLS. . . . . . . . . . . . . . . . . . . . . . . . LAWACAENLANKIKALTLFATHY
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Template Sequence  EKARL. EARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKL
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   174.... .180.........190.........200.........210.........220.........230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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