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Job DescriptionP23909
Confidence98.11%DateThu Jan 5 11:40:34 GMT 2012
Rank44Aligned Residues139
% Identity17%Templatec2ihyB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   593......600.... .....610.........620.......
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Query Sequence  NEPFIANPLNLS. PQRRMLIITGPNMGGKSTYMRQT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKXPGKVGYSAETVRQHIGFVSHSLLEKFQ
Template Known Secondary structure  TTTT


TTSSTTSS

STTB
TTSTT

TT
TTS
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   628.630.........640.........650.........660.........670.........680.... .....690........
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Query Sequence  . . . . . . . . ALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNA. TEYSLVLMDEIGRG
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Template Sequence  EGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGXSAKAQQYIGYLSTGEKQRVXIARALXGQPQVLILDEPAAG
Template Known Secondary structure  TTSBTTT
SSS


TT
GGGTTSBGGGS
TTT

SSTTTT
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   699700.........710.........720.........730.
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Query Sequence  TSTYDGLSLAWACAENLANKIKALTLFATHYFE
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Template Sequence  LDFIARESLLSILDSLSDSYPTLAXIYVTHFIE
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   173......180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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