Return to main results Retrieve Phyre Job Id

Job DescriptionP23909
Confidence97.89%DateThu Jan 5 11:40:34 GMT 2012
Rank59Aligned Residues137
% Identity12%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   593......600.... .....610.........620.........630.........640.........650.....
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Query Sequence  NEPFIANPLNLS. PQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFT. . . . . . . . . . . . . . . .
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Template Sequence  SDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLA. . . . . . . . . EMDKVEGHVAIKGSVAYVPQQAWIQNDSLRENI
Template Known Secondary structure  TS

S
TT

STTSSTT.........
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   656...660.........670.........680.........690... ......700.........710.........720......
 
   656...660.........670.. .......680.........690.........700.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . RVGAADDLASGRSTFMV. EMTETANILHNATEYSLVLMDEIGRGTSTYDGLSL
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Template Sequence  LFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHI
Template Known Secondary structure  TTS


TTTT
TTSTTGGGSSTTSB




SSTTTTS
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   727..730.........740.........750.........760.........770.........780.........790.........800......
 
   708.710.........720.........730........
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Query Sequence  AWACAENLANKIKALTLFATHYFELTQLPEK
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Template Sequence  FENVIGPKGMLKNKTRILVTHSMSYLPQVDV
Template Known Secondary structure  TTSTTSTTTTS
S
STTGGGSS
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   807..810.........820.........830.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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