Job Description P23909 Confidence 90.22% Date Thu Jan 5 11:40:34 GMT 2012 Rank 254 Aligned Residues 164 % Identity 14% Template c2a5yB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex Resolution 2.60 Å

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		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.								640	.	.	.	.	.	.			.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.								.	.																												.
Query SS confidence																																						.	.	.	.	.	.	.								.	.																												.
Query Sequence		S	P	Q	R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	L	I	A	L	M	A	Y	I	G	S	Y	.	.	.	.	.	.	.	V	P	A	Q	K	V	E	.	.	I	G	P	I	D	R	I	F	T	R	V	G	A	A	D	D	L	A	S	G	R	S	T	F	M	V	E	.
Query Conservation																																						.	.	.	.	.	.	.								.	.																												.
Alig confidence																																						.	.	.	.	.	.	.								.	.																												.
Template Conservation
Template Sequence		D	L	D	S	F	F	L	F	L	H	G	R	A	G	S	G	K	S	V	I	A	S	Q	A	L	S	K	S	D	Q	L	I	G	I	N	Y	D	S	I	V	W	L	K	D	S	G	T	A	P	K	S	T	F	D	L	F	T	D	I	L	L	M	L	K	S	E	D	D	L	L	N	F	P	S	V	E	H	V	T	S
Template Known Secondary structure		T	S	S	S								S	T	T	S	S													S	S	T	B	T	T	T	B	S											S	T	T														T	T	T	S			T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
				674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	M	T	E	T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q	L	P	E	K	M	E	G	V	A	N	V	H	L	D	A	L	E
Query Conservation		.	.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	L	K	R	M	I	C	N	A	L	I	D	R	P	N	T	L	F	V	F	D	D	V	V	Q	.	.	.	.	.	.	.	.	.	.	.	E	E	T	I	R	W	A	Q	E	L	.	R	L	R	C	L	V	T	T	R	D	V	E	I	S	N	A	A	S	Q	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	S	T	T											.	.	.	.	.	.	.	.	.	.	.										T	.	T								S	B	G	G	G	G	G	G			S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.												.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	D	T	I	A	F	M	H	S	V	Q	D	G	A	A	S	K	S	Y	G	L	A	V	A	A	L	A	G	V	P	K	E	V	I	K	R	A	R	Q	K	L	R	E	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	C	E	F	I	E	V	T	S	L	E	I	D	E	C	Y	D	F	L	E	A	Y	G	M	P	M	P	E	K	E	E	D	V	L	N	K	T	I	E	L	S
Template Known Secondary structure		.	.	.	.	.																					T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions