Job Description P23909 Confidence 86.36% Date Thu Jan 5 11:40:34 GMT 2012 Rank 336 Aligned Residues 155 % Identity 12% Template c1t4gA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp Resolution 2.00 Å

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		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.			.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660																		.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	L	I	A	L	M	A	Y	I	.	.	G	S	Y	V	P	A	Q	K	V	E	I	G	P	I	D	R	I	F	T	R	V	G	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	L	A	S	G	R
Query Conservation																																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	V	T	E	F	A	G	V	F	G	S	G	K	T	Q	I	M	H	Q	S	C	V	N	L	Q	N	P	E	F	L	F	Y	D	E	E	A	V	S	K	G	E	V	A	Q	P	K	A	V	Y	I	D	T	E	G	T	F	R	P	E	R	I	M	Q	M	A	E	H	A	G	I	D	G	Q	T	V	L	D	N	T
Template Known Secondary structure		T	S							S	T	T	S	S												T	T		G	G	G					T	T	T	S		G	G	G	G	S	S								S	S	S															T	S								T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		668									.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.									.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.				.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		S	.	.	.	.	.	.	.	.	T	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	.	.	.	.	.	.	.	.	E	I	G	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	.	.	.	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A	T	H
Query Conservation			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																			.	.	.
Alig confidence			.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		F	V	A	R	A	Y	N	S	D	M	Q	M	L	F	A	E	K	I	E	D	L	I	Q	E	G	N	N	I	K	L	V	V	I	D	S	L	T	S	T	F	R	N	E	Y	T	G	R	G	K	L	A	E	R	Q	Q	K	L	G	R	H	M	A	T	L	N	K	L	A	D	L	F	N	C	V	V	L	V	T	N	Q
Template Known Secondary structure							S	S										T							T	T											S	S							S		S	T	T	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	E	L	T	Q	L	P	E	K	M	E	G	V	A	N	V	H	L	D	A	L	E	H	G	D	T	I	A	F	M	H	S	V	Q	D	G	A	A	S	K	S
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	S	G	H	A	A	T	F	R	F	F	V	R	K	G	K	G	D	K	R	V	A	K	L	Y	D	S	P	H	L	P	D	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.						S									S	T	T										S	S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		258										.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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