Job Description P23909 Confidence 95.91% Date Thu Jan 5 11:40:34 GMT 2012 Rank 116 Aligned Residues 108 % Identity 19% Template c1nsfA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf) Resolution 1.90 Å

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		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	P	I	D	R	I	F	T	R	V	G	A	A	D	D	L	A	S	G	R	S	T	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	Y
Query Conservation
Alig confidence																								.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	V	L	L	E	G	P	P	H	S	G	K	T	A	L	A	A	K	I	A	E	.	.	.	.	.	E	S	N	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	K	I	C	S	P	D	K	M	I	G	F	S	E	T	A	K	C	Q	A	M	K	K	I	F	D	D	A	Y	K	S	Q	L
Template Known Secondary structure									S	T	T	S	S											.	.	.	.	.					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G	S	T	T																			T	S	S
Template Predicted Secondary structure																								.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.						.	560	.	.	.															.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		688	.	690	.	.	.	.	.	.						.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.					.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																				.	.	.	.
Query SS confidence											.	.	.	.	.																				.	.	.	.
Query Sequence		S	L	V	L	M	D	E	I	G	.	.	.	.	.	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	A	E	N	L	.	.	.	.	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q
Query Conservation											.	.	.	.	.																				.	.	.	.
Alig confidence											.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		S	C	V	V	V	D	D	I	E	R	L	L	D	Y	V	P	I	G	P	R	F	S	N	L	V	L	Q	A	L	L	V	L	L	K	K	A	P	P	Q	G	R	K	L	L	I	I	G	T	T	S	R	K	D	V	L	Q
Template Known Secondary structure													T	T		B	T	T	T	T	B													T	T				S	T	T										S
Template Predicted Secondary structure
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions