Return to main results Retrieve Phyre Job Id

Job DescriptionP23909
Confidence95.72%DateThu Jan 5 11:40:34 GMT 2012
Rank130Aligned Residues131
% Identity8%Templatec1fnnB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   604.....610.........620.........630.........640.........650........ .660.........670.........680.
Predicted Secondary structure 


























..




Query SS confidence 






















































. .






















Query Sequence  SPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVG. . AADDLASGRSTFMVEMTETANIL
Query Conservation         











 

 


  





  


  
 
 
 
 





..  
 
  
 


  

 
   

Alig confidence 






















































..






















Template Conservation        
 
 
  
 


 

   
  
                             
                      
Template Sequence  GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHL
Template Known Secondary structure  BSS



TTSSTTS


TTT

ST



SS


Template Predicted Secondary structure 






























Template SS confidence 















































































   40.........50.........60.........70.........80.........90.........100.........110.........
 
   682.......690.........700.........710.........720.........730....
Predicted Secondary structure 

















Query SS confidence 




















































Query Sequence  HNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQ
Query Conservation    

  












  

 


 



 
        




  

  
Alig confidence 




















































Template Conservation             
            
                 
  
       
Template Sequence  RERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLN
Template Known Secondary structure  TT

TGGGS
TT
SSB
SST
Template Predicted Secondary structure 




















Template SS confidence 




















































   120.........130.........140.........150.........160.........170..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions