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Job DescriptionP23909
Confidence100.00%DateThu Jan 5 11:40:34 GMT 2012
Rank6Aligned Residues447
% Identity45%Templatec1ewrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of taq muts
Resolution3.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  DNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTA
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Template Sequence  ANYLAAIATGDG. WGLAFLDVSTGEFKGTVLKSKSALYDELFRHRPAEVLLAPELLENGAFLDEFRKRSEAPF. . . . . . .
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   131........140.. .......150.........160.........170.........180.........190.........200..
 
   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  RQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAEN
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Template Sequence  . . . . . . . . . . . . . . EPEGEGPLALRRARGALLAYAQRTQGGALS. LQPFRFYDPGAFXRLPEATLRALEVFEPLRG. . QD
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GGGS
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   208.210.........220.........230....... ..240.........250.........260........ .270
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  TLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAGLQPVLRQVGDLERILARLALRTARPRDLARMR
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Template Sequence  TLFSVLDETRTAPGRRLLQSWLRHPLLDRGPLEARLDRVEGFVREGALREGVRRLLYELGRASP. . . . . . . . . . . . . . . .
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   271........280.........290.........300.........310.........320.........330....
 
   370.........380.........390.........400.........410.........420.........430.........440.........
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Query Sequence  HAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLER
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   450.........460.........470.........480.........490.........500.........510.........520.........
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Query Sequence  LEVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   530.........540.........550.........560.........570.........580.........590.........600.........
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Query Sequence  ELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRM
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Template Sequence  . . . . . . . KDLGALREAARILAELDVYAALAEVAVRYGYVRPRFGDR. . LQIRAGRHPVVER. . RTEFVPNDLEX. . AHEL
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TT
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   347..350.........360.........370.........380..... ....390........ .400......... 410...
 
   610.........620.........630.........640.........650.........660.........670.........680.........
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Query Sequence  LIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSL
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Template Sequence  VLITGPNXAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGA. . . . . . GKSTFXVEXEEVALILKEATENSL
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SSSST

BSSS

SB




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   579580.........590.........600.........610.........620........ .630.........640.........650..
 
   690.........700.........710.........720.........730.........740.........750.........760.........
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Query Sequence  VLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASK
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Template Sequence  VLLDEVGRGTSSLDGVAIATAVAEALHER. RAYTLFATHYFELTALG. . LPRLKNLHVAAREEAGGLVFYHQVLPGPASK
Template Known Secondary structure  S
S
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   659660.........670.........680....... ..690.........700.... .....710.........720.........730.....
 
   770.........780.........790.........
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Query Sequence  SYGLAVAALAGVPKEVIKRARQKLRELESI
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Template Sequence  SYGVEVAAXAGLPKEVVARARALLQAXAAR
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   736...740.........750.........760.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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