Return to main results Retrieve Phyre Job Id

Job DescriptionP00888
Confidence100.00%DateThu Jan 5 10:56:59 GMT 2012
Rank13Aligned Residues255
% Identity16%Templated1o60a_
SCOP infoTIM beta/alpha-barrel Aldolase Class I DAHP synthetase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  ISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDVEAG
Query Conservation 
  

 
 
 




 




 
    



  
            



    




 





 

       

 
Alig confidence 












































.












.........











Template Conservation 
    

   
  





  


   
  
  

  
   


 .

 
      


.........          
 
Template Sequence  IGNIDVANDKPFVLFGGXNVLESRDXAXQVCEAYVKVTEKLGVPY. VFKASFDKANRSS. . . . . . . . . IHSYRGPGXEEG
Template Known Secondary structure  TT
TTS




T

.S

TT
SS.........TTS


S
Template Predicted Secondary structure 















.








.........









Template SS confidence 















































































   8.10.........20.........30.........40.........50.. .......60..... ....70.......
 
   124.....130.........140.........150.........160.........170.........180.........190.........200...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRA
Query Conservation 
   
 
     
 






 

     
  


    




 


 


 



  





 
 
 
  

 

 
Alig confidence 







...

































































...
Template Conservation 
  
    ...   

   

  
      
   
   



    
  

  

  








 
 
  
   
...
Template Sequence  LKIFQELK. . . DTFGVKIITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAXAKTGAVINVKKPQFLSPSQXGNI. . .
Template Known Secondary structure  ...



SGGGTT
S
GGGTT
TT


TTS
GGG...
Template Predicted Secondary structure  ...



















...
Template SS confidence 















































































   78.80..... ....90.........100.........110.........120.........130.........140.........150.
 
   204.....210.........220.........230.........240.........250.........260.........270.........280...
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  AAQPHRFVGINQAGQVALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVA
Query Conservation 
   
 

 
   
    
 
 

   






  


    
      
 
      



 




 
    

 
 
Alig confidence  ...............



















































.











Template Conservation  ...............   
   

  
 
  

  

      

  
  
       


 




. 
         
Template Sequence  . . . . . . . . . . . . . . . VEKIEECGNDKIILCDRGTNFGYDNLIVDXLGFSVXKKASKGSPVIFDVTHS. LQRAQVTELARS
Template Known Secondary structure  ...............TT





STT


TTTTS

.


TT
Template Predicted Secondary structure  ...............






















.


Template SS confidence 















































































   152.......160.........170.........180.........190.........200... ......210.....
 
   284.....290.........300.........310.........320....... ..330.........340.........
Predicted Secondary structure 

























..




Query SS confidence 











































. .





















Query Sequence  ESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVT. . DACISWEMTDALLREIHQDLNG
Query Conservation    
  
       
 







  
 
        
  
 


..
 

 
  

 

  


 
  
Alig confidence 



........




















.......



..
....
















Template Conservation 


 ........

 
 




 
 
    
  ....... 

 
  ....
  

  

 
      
Template Sequence  GLAV. . . . . . . . GIAGLFLEAHPNPNQAKCDGP. . . . . . . SALPLSA. . . . LEGFVSQXKAIDDLVKS
Template Known Secondary structure  ........

SSSGGG
SS

T.......T
GGG....
Template Predicted Secondary structure 
........













.......


....
Template SS confidence 



































































   228.230. ........240.........250.. ....... 260.........270......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions