Job Description P00888 Confidence 100.00% Date Thu Jan 5 10:56:59 GMT 2012 Rank 12 Aligned Residues 257 % Identity 18% Template d1d9ea_ SCOP info TIM beta/alpha-barrel Aldolase Class I DAHP synthetase Resolution 2.40

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		I	S	D	I	I	A	G	R	D	P	R	L	L	V	V	C	G	P	C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	.	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A
Query Conservation																																																										.
Alig confidence																																														.	.											.				.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.															.	.	.	.	.	.	.	.	.
Template Sequence		I	G	D	I	N	V	A	N	D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	.	.	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	.	.	.	.	.	.	.	.	.	I	H	S	Y	R	G	P	G	L	E	E
Template Known Secondary structure			T	T					T	T	S																																T			.	.							S			T	T		S	S	.	.	.	.	.	.	.	.	.	T	T	S				S
Template Predicted Secondary structure																																														.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.			.	.	.	.	.	.	.	.	1060	.	.	.	.	.										.	.	.	.	1070	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L	P	L	A	T	E	A	L	D	P	N	S	P	Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T	A	I	N	A	M	R
Query Conservation
Alig confidence										.	.	.																																																																				.	.
Template Conservation										.	.	.																																																																				.	.
Template Sequence		G	M	K	I	F	Q	E	L	.	.	.	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	.	.
Template Known Secondary structure										.	.	.														S	G	G	G						T	T		S						G	G	G	T	T											T	T									T	T	S		G	G	G					.	.
Template Predicted Secondary structure										.	.	.																																																																				.	.
Template SS confidence
		1077	.	.	1080	.	.	.	.				.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	G	Q	V	A	L	L	Q	T	Q	G	N	P	D	G	H	V	I	L	R	G	G	K	A	P	N	Y	S	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	S	L	M	V	D	C	S	H	G	N	S	N	K	D	Y	R	R	Q	P	A	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	.	L	Q	R	A	Q	V	A	E	L	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T														S	S	S						T	T									T	T	S											.				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence
																		1152	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.		.	.	.	.	.	.	1210	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	V	V	A	Q	I	K	D	G	N	R	S	I	I	G	L	M	I	E	S	N	I	H	E	G	N	Q	S	S	E	Q	P	R	S	E	M	K	Y	G	V	S	V	T	D	A	C	I	S	W	E	M	T	D	A	L	L	R	E	I	H	Q	D	L	N	G	Q	L	T	A	R	V	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	M	A	V	.	.	.	.	.	.	.	.	G	L	A	G	L	F	I	E	A	H	P	D	P	E	P	S	A	L	P	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	P	F	L	K	Q	M	K	A	I	D	D	L	V	K	G	F	E	E	L	D	T	S
Template Known Secondary structure							.	.	.	.	.	.	.	.			S								S	S								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1227	.	.	1230	.									.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.																.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions