Job Description P00888 Confidence 21.65% Date Thu Jan 5 10:56:59 GMT 2012 Rank 103 Aligned Residues 169 % Identity 15% Template c3tr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii Resolution 1.90 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	.	G	L	P	L	A	T	E
Query Conservation																																																																										.
Alig confidence																					.	.	.	.	.	.	.								.	.			.	.	.	.	.	.	.	.	.					.	.																					.
Template Conservation																					.	.	.	.	.	.	.								.	.			.	.	.	.	.	.	.	.	.					.	.
Template Sequence		D	L	N	S	A	L	R	T	A	E	K	X	V	D	E	G	A	D	I	.	.	.	.	.	.	.	L	D	I	G	G	E	A	.	.	T	N	.	.	.	.	.	.	.	.	.	P	F	V	S	.	.	P	S	T	Q	I	E	L	D	R	L	L	P	V	I	D	A	I	K	K	R	F	P	Q	L	I	S	V	D
Template Known Secondary structure		S														T	T		S		.	.	.	.	.	.	.								.	.	S		.	.	.	.	.	.	.	.	.	T	T			.	.																							S
Template Predicted Secondary structure																					.	.	.	.	.	.	.								.	.			.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.			.	.										.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure															.						.																																.	.	.	.	.	.	.	.	.
Query SS confidence															.						.																																.	.	.	.	.	.	.	.	.
Query Sequence		A	L	D	P	N	S	P	Q	Y	L	G	D	L	.	F	S	W	S	A	.	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	.	.	.	.	.	.	.	.	.	L	A	T	A	I	N	A	M	R	A	A	A	Q	P	H	R	F	V	G	I
Query Conservation															.						.																																.	.	.	.	.	.	.	.	.
Alig confidence															.						.																																.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	R	P	R	V	X	R	E	A	V	N	T	G	A	D	X	I	N	D	Q	R	A	L	Q	L	D	D	A	L	T	T	V	S	A	L	K	T	P	V	C	L	X	H	F	P	S	E	T	R	K	P	G	S	T	T	H	F	Y	F	L	Q	S	V	K	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S												T							T	T	T	T		S	T	T									T											T	T			T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																		.										.	.
Query SS confidence																																																		.										.	.
Query Sequence		N	Q	A	G	Q	V	A	L	L	Q	T	Q	G	N	P	D	G	H	V	I	L	R	G	G	K	A	P	N	Y	S	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	.	S	L	M	V	D	C	S	H	G	.	.	N	S	N	K	D	Y	R	R	Q	P	A	V	A	E	S	V	V	A	Q	I
Query Conservation																																																		.										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	E	S	I	Q	R	C	K	K	A	G	I	S	E	D	R	I	I	I	D	P	G	F	G	Q	G	N	Y	G	K	N	V	S	E	N	F	Y	L	L	N	K	L	P	E	F	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			G	G	G									S	G	G	G													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	G	N	R	S	I	I	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	X	G	L	P	V	L	S	G	W
Template Known Secondary structure		T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions