Job Description P00888 Confidence 100.00% Date Thu Jan 5 10:56:59 GMT 2012 Rank 14 Aligned Residues 244 % Identity 18% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	I	I	A	G	R	D	P	R	L	L	V	V	C	G	P	C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A	G
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.									.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.									.
Template Sequence		L	Y	D	F	E	V	G	L	D	Q	P	F	F	L	I	A	G	T	C	V	V	E	S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	.	.	.	.	.	.	.	.	.	P	F	I	Y	K	S	S	M	.	D	E	G
Template Known Secondary structure			T	T				S	T	T	S									S	S																					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		.	.	.	.	.	.	.	.	.									.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																	.	.										.	.	.	.	50	.	.	.		.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L	P	L	A	T	E	A	L	D	P	N	S	P	Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T	A	I	N	A	M	.	R
Query Conservation																																																																																.
Alig confidence									.	.	.																																																																					.
Template Conservation									.	.	.
Template Sequence		L	R	I	L	G	E	V	.	.	.	K	R	Q	L	G	L	P	V	L	T	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	V	D	V	L	Q	T	P	A	F	L	C	R	Q	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K
Template Known Secondary structure									.	.	.					T									S									T	T		S						G	G	G	T	T										T	T	S	S								T	T	S		G	G	G
Template Predicted Secondary structure									.	.	.
Template SS confidence
		73	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	G	Q	V	A	L	L	Q	T	Q	G	N	P	D	G	H	V	I	L	R	G	G	K	A	P	N	Y	S	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	S	L	M	V	D	C	S	H	G	N	S	.	.	N	K	D	Y	R	R	Q	P
Query Conservation																																																																								.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.															.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.
Template Sequence		A	R	E	A	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	.	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	.	T	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			S													S	.	S	S												G	G	G	.	G	S	S										T						T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.
Template SS confidence
		150	.	.	.	.	.														.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	E	S	V	V	A	Q	I	K	D	G	N	R	S	I	I	G	L	M	I	E	S	N	I	H	E	G	N	Q	S	S	E	Q	P	R	S	E	M	K	Y	G	V	S	V	T	D	A	C	I	S	W	E	M	T	D	A	L	L	R	E	I	H	Q	D	L	N	G	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	R	A	A	V	A	T	.	.	.	.	.	.	.	G	V	A	G	L	F	M	E	T	H	P	N	P	A	E	A	K	S	D	G	P	N	.	.	.	.	.	.	.	.	.	.	.	.	A	V	P	L	N	R	M	G	A	L	L	E	T	L	V	T	L	D	Q	A	V
Template Known Secondary structure										.	.	.	.	.	.	.			S								S		T	T	T			T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230								.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.													.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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