Job Description P00888 Confidence 29.37% Date Thu Jan 5 10:56:59 GMT 2012 Rank 80 Aligned Residues 133 % Identity 16% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	S	R	K	S	I	S	D	I	I	A	G	R	D	P	R	L	L	V	V	C	G	P	C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G
Query Conservation
Alig confidence																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	A	K	R	V	P	V	I	A	G	.	T	G	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	.	.	.	.	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	.	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S						.				S	S															T		.	.	.	.	S									S	S			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110		.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	V	E	A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L	P	L	A	T	E	A	L	D	P	N	S	P	Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T
Query Conservation
Alig confidence		.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.									.
Template Conservation		.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.									.
Template Sequence		.	.	.	.	E	G	I	Y	Q	H	F	K	T	I	A	.	.	.	E	A	T	S	I	P	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	N	V	P	G	R	T	V	V	S	M	T	N	D	T	I	L	R	L	A	E	.	I	P	N	I	V	G	V	K	.	E	A	S	G	N	I	G	S
Template Known Secondary structure		.	.	.	.												.	.	.		T			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S											T	T	.	S	T	T						.			S
Template Predicted Secondary structure		.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.									.
Template SS confidence
						113	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.															.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	A	M	R	A	A	A	Q	P	H	R	F	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	E	L	I	N	R	A	P	E	G	F	V	V	L	S
Template Known Secondary structure									S		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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