Job Description P00888 Confidence 87.33% Date Thu Jan 5 10:56:59 GMT 2012 Rank 25 Aligned Residues 148 % Identity 15% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	S	R	K	S	I	S	D	I	I	A	G	R	D	P	R	L	L	V	V	C	G	P	C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G
Query Conservation
Alig confidence																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	.	V	A	S	T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A	.	.	.	.	D	G	I	L	A	I	L	E	A	Y	F	P	L	.	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S		B				.				S	S															T		.	.	.	.	S									S	S			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.		.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	V	E	A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L	P	L	A	T	E	A	L	D	P	N	S	P	Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T
Query Conservation
Alig confidence		.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template Conservation		.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template Sequence		.	.	.	.	A	Q	I	E	S	Y	F	R	A	I	A	.	.	.	D	A	V	E	I	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	.	E	H	P	R	I	R	Y	I	K	D	A	.	S	T	N	T	G	R
Template Known Secondary structure		.	.	.	.												.	.	.				S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T		S	S												.	T	S	T	T								.	S	S
Template Predicted Secondary structure		.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template SS confidence
						116	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.															.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		A	I	N	A	M	R	A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	.	.	.	.	.	.	.	.	G	Q	V	A	L	L	Q	T	Q	G	N
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	S	I	I	N	R	C	G	D	A	L	Q	V	F	S	A	S	A	H	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C
Template Known Secondary structure										G	G	G	S						T	T	S								T	T							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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