Job Description P00888 Confidence 53.24% Date Thu Jan 5 10:56:59 GMT 2012 Rank 46 Aligned Residues 93 % Identity 19% Template c3d6nB_ PDB info PDB header:hydrolase/transferase Chain: B: PDB Molecule:aspartate carbamoyltransferase; PDBTitle: crystal structure of aquifex dihydroorotase activated by aspartate2 transcarbamoylase Resolution 2.30 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	.	.	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L
Query Conservation																																								.	.
Alig confidence																																.	.	.						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	R	E	E	V	E	E	I	L	K	Y	A	K	E	F	K	E	G	K	E	E	T	I	K	A	S	A	V	L	.	.	.	F	F	S	E	P	S	T	R	T	R	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	K	A	A	R	E	L	G	I
Template Known Secondary structure																			T	T												.	.	.			S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.																										.	.	.	.	.	.	.	.	60	.
		140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.										.																.
Query SS confidence											.	.	.	.	.	.	.	.	.	.										.																.
Query Sequence		P	L	A	T	E	A	L	D	P	.	.	.	.	.	.	.	.	.	.	N	S	P	Q	Y	L	G	D	L	.	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	.	H	R	E	M	A	S	G	L	S	M	P	V
Query Conservation											.	.	.	.	.	.	.	.	.	.										.																.
Alig confidence											.	.	.	.	.	.	.	.	.	.										.				.	.											.
Template Conservation																																		.	.
Template Sequence		E	T	Y	L	V	S	G	S	E	S	S	T	V	K	G	E	S	F	F	D	T	L	K	T	F	E	G	L	G	F	D	Y	.	.	V	V	F	R	V	P	F	V	F	F	P	Y	K	E	I	V	K	S	L	N	L	R	L
Template Known Secondary structure								T	T	T	T	S			T	T													T	T		S		.	.						S	S				S							T		S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions