Job Description P00888 Confidence 25.79% Date Thu Jan 5 10:56:59 GMT 2012 Rank 87 Aligned Residues 129 % Identity 16% Template c2dzaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of dihydropteroate synthase from thermus2 thermophilus hb8 in complex with 4-aminobenzoate Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T	A	I	N	A	M	R	A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	G	Q	V	A	L	L	Q	T	Q	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																				.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																				.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	V	A	E	G	A	D	I	L	D	L	G	A	E	S	L	L	.	.	P	V	L	E	A	V	L	S	L	G	V	P	V	S	V	D	T	R	K	P	E	V	A	E	E	A	L	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	H	L	L	N	D	V	T	G	L	R	D	E	R
Template Known Secondary structure							T		S											.	.								T	T		S							S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T		S
Template Predicted Secondary structure																				.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
								227	.	.	230	.	.	.	.					.	.	.		.	.	240	.	.	.											.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.									.	.	.	.				.							.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.									.	.	.	.				.							.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	N	P	D	G	H	V	I	L	.	.	.	.	R	G	G	.	K	A	P	N	Y	S	.	.	.	.	.	.	.	.	.	.	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	S	L	M	V	D	C	S	H	G	N	S	N	K	D	Y	R	R	Q	P	A	V	A	E	S
Query Conservation		.	.	.	.	.	.									.	.	.	.				.							.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.									.	.	.	.				.							.	.	.	.	.	.	.	.	.	.																	.											.
Template Conservation																																																								.											.
Template Sequence		M	V	A	L	A	A	R	H	G	V	A	A	V	V	M	H	M	P	V	P	D	P	A	T	M	M	A	H	A	R	Y	R	D	V	V	A	E	V	K	A	F	L	E	A	Q	A	R	R	A	L	S	A	G	V	.	P	Q	V	V	L	D	P	G	F	G	.	F	G	K	L	L	E	H	N	L	A	L	L	R	R
Template Known Secondary structure										T									S	S	S		T	T	T	G	G	G	G				S	S																			T	T		.	S								T	T	.	S	S												T
Template Predicted Secondary structure																																																								.											.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	Q	I	K	D	G	N	R	S	I	I	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	I	V	A	L	G	H	P	V	L	V	G	L
Template Known Secondary structure		T					T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions