Job Description P00888 Confidence 82.68% Date Thu Jan 5 10:56:59 GMT 2012 Rank 27 Aligned Residues 161 % Identity 14% Template c2bmbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:folic acid synthesis protein fol1; PDBTitle: x-ray structure of the bifunctional 6-hydroxymethyl-7,8-2 dihydroxypterin pyrophosphokinase dihydropteroate synthase3 from saccharomyces cerevisiae Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	.	.	.	.	.	.	G	L	P	L	A	T	E	A	L
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																												.	.			.	.	.	.	.	.	.	.	.									.																		.	.	.	.	.	.
Template Conservation																												.	.			.	.	.	.	.	.	.	.	.									.
Template Sequence		L	N	D	I	I	K	L	C	K	D	A	L	Y	L	H	E	S	V	I	I	D	V	G	G	C	S	.	.	T	R	.	.	.	.	.	.	.	.	.	P	N	S	I	Q	A	S	E	.	E	E	E	I	R	R	S	I	P	L	I	K	A	I	R	E	S	T	E	L	P	Q	D	K	V	I	L	S	I	D	T	Y
Template Known Secondary structure														T	T		S									S		.	.		S	.	.	.	.	.	.	.	.	.	T	T							.																		S	S	S		G	G	G
Template Predicted Secondary structure																												.	.			.	.	.	.	.	.	.	.	.									.
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.			.	.										.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure													.						.
Query SS confidence													.						.
Query Sequence		D	P	N	S	P	Q	Y	L	G	D	L	.	F	S	W	S	A	.	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T	A	I	N	A	M	R	A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	G	Q	V	A	L	L	Q	T
Query Conservation													.						.
Alig confidence													.						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	N	V	A	K	E	A	I	K	V	G	V	D	I	I	N	D	I	S	G	G	L	F	D	S	N	M	F	A	V	I	A	E	N	P	E	I	C	Y	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	T
Template Known Secondary structure												T	T							T	T	T	T	S	S		T	T							T		T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680																																				.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.																																			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		Q	G	N	P	D	G	H	V	I	L	R	G	G	K	A	P	N	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	.	S	L	M	V	D	C	S	H
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence												.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation												.	.	.	.	.
Template Sequence		R	G	D	I	S	T	M	N	R	L	.	.	.	.	.	A	H	Y	E	N	F	A	L	G	D	S	I	Q	Q	E	F	V	H	N	T	D	I	Q	Q	L	D	D	L	K	D	K	T	V	L	I	R	N	V	G	Q	E	I	G	E	R	Y	I	K	A	I	D	N	G	V	K	R	W	Q	I	L	I	D	P	G	L
Template Known Secondary structure			S		T	T	T	G	G	G		.	.	.	.	.				S	S		T	T	T	T	T							T	T			G	G	G	S	T	T																									T	T			G	G	G							T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.						.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	N	K	D	Y	R	R	Q	P	A	V	A	E	S	V
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		G	.	F	A	K	T	W	K	Q	N	L	Q	I	I	R	H	I
Template Known Secondary structure		T	.	S	S												T
Template Predicted Secondary structure			.
Template SS confidence
		759		760	.	.	.	.	.	.	.	.	.	770	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions