Job Description P00888 Confidence 100.00% Date Thu Jan 5 10:56:59 GMT 2012 Rank 6 Aligned Residues 242 % Identity 23% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	D	I	I	A	G	R	D	P	R	L	L	V	V	C	G	P	C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A
Query Conservation
Alig confidence												.																																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.									.
Template Conservation												.																																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.									.
Template Sequence		E	V	E	G	V	R	I	G	G	G	.	S	K	A	V	I	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	.	.	.	.	.	.	.	L	R	G	G	A	F	K	P	R	T	S	.	.	.	.	.	.	.	.	.	P	Y	S	F	Q	G	L	G	.	L	E
Template Known Secondary structure				T	T				B	T	T	.	B								S	B																		T		S		.	.	.	.	.	.	.				B	S	S				S	S	.	.	.	.	.	.	.	.	.	T	T	S					T	.
Template Predicted Secondary structure												.																																.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.									.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.		.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L	P	L	A	T	E	A	L	D	P	N	S	P	Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T	A	I	N	A	M	R
Query Conservation
Alig confidence											.	.	.																																																																			.	.
Template Conservation											.	.	.																																																																			.	.
Template Sequence		G	L	K	L	L	R	R	A	G	.	.	.	D	E	A	G	L	P	V	V	T	E	V	L	D	P	R	H	V	E	T	V	S	R	Y	A	D	M	L	Q	I	G	A	R	N	M	Q	N	F	P	L	L	R	E	V	G	R	S	G	K	P	V	L	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	.	.
Template Known Secondary structure											.	.	.				T										G	G	G									S						G	G	G	T	T																					T	T										.	.
Template Predicted Secondary structure											.	.	.																																																																			.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	G	Q	V	A	L	L	Q	T	Q	G	N	P	D	G	H	V	I	L	R	G	G	K	A	.	P	N	Y	S	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	S	L	M	V	D	C	S	H	G	N	S	N	K	D	Y	R	R	Q	P	A
Query Conservation																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Y	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R	F	T	L	D	V	A	A	V	A	V	L	K	E	A	T	H	L	P	V	I	V	D	P	S	H	P	A	G	R	R	S	L	V	.	P	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T											B			S			S	S	S	S	B													B	S	S												S	G	G	G		.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
																		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	S	V	V	A	Q	I	K	D	G	N	R	S	I	I	G	L	M	I	E	S	N	I	H	E	G	N	Q	S	S	E	Q	P	R	S	E	M	K	Y	G	V	S	V	T	D	A	C	I	S	W	E	M	T	D	A	L	L	R	E	I
Query Conservation
Alig confidence									.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	G	L	A	A	.	.	.	.	.	.	.	G	A	D	G	L	I	V	E	V	H	P	N	P	E	E	A	L	S	D	A	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	T	P	G	E	F	A	R	L	M	G	E	L
Template Known Secondary structure								T	.	.	.	.	.	.	.	T		S						B		S	S	G	G	G		S	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure									.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.								.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.													.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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