Job Description P00888 Confidence 98.82% Date Thu Jan 5 10:56:59 GMT 2012 Rank 20 Aligned Residues 250 % Identity 15% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		I	S	D	I	I	A	G	R	D	P	R	L	L	V	V	C	G	P	C	S	I	H	.	.	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E
Query Conservation																								.	.
Alig confidence																								.	.																			.	.	.	.	.																		.	.	.	.
Template Conservation																																												.	.	.	.	.																		.	.	.	.
Template Sequence		I	A	N	K	T	V	G	K	D	A	P	V	F	I	I	A	E	A	G	I	N	H	D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	.	.	.	.	.	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	.	.	.	.	D	V	S	I	F	S	L	V	Q	S	X	E
Template Known Secondary structure			T	T					T	T	S										T	T	T	T	T																T		S	.	.	.	.	.							B		G	G	G	G	T	S				.	.	.	.								G	G	G	B	S
Template Predicted Secondary structure																																												.	.	.	.	.																		.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N	M	G	L	P	L	A	T	E	A	L	D	P	N	S	P	Q	Y	L	G	D	L	.	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V	G	F	K	N	G	T	D	G	S	L	A	T	A	I	N	A
Query Conservation																																						.
Alig confidence																																						.																																		.
Template Conservation																																																																								.
Template Sequence		X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	.	A	E	I	S	D	V	H	E	A
Template Known Secondary structure		S		G	G	G											T	T						B			S									T	T			S						G	G	G	T	T										T	T		S							T	T	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		M	R	A	A	A	Q	P	H	R	F	V	G	I	N	Q	A	G	Q	V	A	L	L	Q	T	Q	G	N	P	D	G	H	V	.	.	I	L	R	G	G	K	A	P	N	Y	S	P	A	D	V	A	Q	C	E	K	E	M	E	Q	A	G	L	R	P	S	L	M	V	D	C	S	H	G	N	S	N	K	D	Y	R	R
Query Conservation																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.										.	.	.																														.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																														.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	.	.	.	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	G	F	S	D	H	S	E	H	P	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T											S	S	S	S			G	.	.	.	G	G			T	T									S	T	T	S									S	S	S	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																														.	.	.	.	.
Template SS confidence
																				165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		Q	P	A	V	A	E	S	V	V	A	Q	I	K	D	G	N	R	S	I	I	G	L	M	I	E	S	N	I	H	E	G	N	Q	S	S	E	Q	P	R	S	E	M	K	Y	G	V	S	V	T	D	.	.	A	C	I	S	W	E	M	T	D	A	L	L	R	E	I	H	Q	D	L	N	G	Q
Query Conservation																																																				.	.
Alig confidence		.	.	.	.														.	.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.		.	.
Template Conservation		.	.	.	.														.	.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	E	A	P	C	A	A	V	R	L	G	A	K	.	.	.	.	.	L	I	E	K	H	F	T	I	D	K	N	L	P	.	G	A	.	.	.	.	.	.	.	.	.	.	.	D	H	S	F	A	L	N	P	D	E	L	K	E	X	V	D	G	I	R	K	T	E	A	E	L
Template Known Secondary structure		.	.	.	.	S									T	T		S	.	.	.	.	.						B		S		T	T	S	S	.		S	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S	B
Template Predicted Secondary structure		.	.	.	.														.	.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						219	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.		.	.												.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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