Job Description P00888 Confidence 56.20% Date Thu Jan 5 10:56:59 GMT 2012 Rank 41 Aligned Residues 96 % Identity 26% Template c1a1sA_ PDB info PDB header:transcarbamylase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.										.	.
Query SS confidence																															.	.	.										.	.
Query Sequence		C	S	I	H	D	P	E	T	A	L	E	Y	A	R	R	F	K	A	L	A	A	E	V	S	D	S	L	Y	L	.	.	.	V	M	R	V	Y	F	E	K	P	.	.	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	G	S	F	D	V	E	A	G	L	Q	I	A	R	K	L	L	L	E	L	V	N
Query Conservation																															.	.	.										.	.
Alig confidence																															.	.	.										.	.				.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	A	E	E	I	W	T	I	L	E	T	A	K	M	F	K	I	W	Q	K	I	G	K	P	H	R	L	L	E	G	K	T	L	A	M	I	F	Q	K	P	S	T	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	F	E	V	.	.	.	.	.	.	.	.	.	.	.	.	A	M	A	H
Template Known Secondary structure		S																						T					T	T	T	T								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.													.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	L	P	L	A	T	E	A	L	D	.	.	.	.	.	.	.	.	.	.	P	N	S	P	Q	Y	L	G	D	L	F	S	W	S	A	I	G	A	R	T	T	E	S	Q	T	H	R	E	M	A	S	G	L	S	M	P	V
Query Conservation													.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																				.	.
Template Sequence		L	G	G	H	A	L	Y	L	N	A	Q	D	L	Q	L	R	R	G	E	T	I	A	D	T	A	R	V	L	S	R	Y	V	D	A	.	.	I	M	A	R	V	Y	D	H	K	D	V	E	D	L	A	K	Y	A	T	V	P	V
Template Known Secondary structure		T	T								T	T	T			S	S	S	S	S														S		.	.						S	S												S	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions